RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.71■■□□□ 1.07
ME3-212ENST00000543262 IGF2BP3O00425 579 aaKnown RBP eCLIP21.7■■□□□ 1.06
ME3-212ENST00000543262 ERBB2P04626 1255 aa21.7■■□□□ 1.06
ME3-212ENST00000543262 ITIH2P19823 946 aa21.7■■□□□ 1.06
ME3-212ENST00000543262 DENND2CQ68D51 928 aa21.7■■□□□ 1.06
ME3-212ENST00000543262 ACSF2Q96CM8 615 aaPredicted RBP21.7■■□□□ 1.06
ME3-212ENST00000543262 OSMRQ99650 979 aa21.7■■□□□ 1.06
ME3-212ENST00000543262 BARX2Q9UMQ3 279 aaPredicted RBP21.7■■□□□ 1.06
ME3-212ENST00000543262 GRIN2DO15399 1336 aa21.7■■□□□ 1.06
ME3-212ENST00000543262 VDRP11473 427 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 CYP2C9P11712 490 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 HPDP32754 393 aaPredicted RBP21.69■■□□□ 1.06
ME3-212ENST00000543262 NDST1P52848 882 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 INCA1Q0VD86 236 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 PDCLQ13371 301 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 SLC29A2Q14542 456 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 SLMAPQ14BN4 828 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 CNGA2Q16280 664 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 SKIDA1Q1XH10 827 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 UBAP2Q5T6F2 1119 aaKnown RBP21.69■■□□□ 1.06
ME3-212ENST00000543262 AGBL2Q5U5Z8 902 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 SLC27A1Q6PCB7 646 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 DPH6Q7L8W6 267 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 TLK2Q86UE8 772 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 XYLT1Q86Y38 959 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 SNF8Q96H20 258 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 EIF2AQ9BY44 585 aaKnown RBP21.69■■□□□ 1.06
ME3-212ENST00000543262 CALCOCO1Q9P1Z2 691 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 NEU2Q9Y3R4 380 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 M0QYV0 167 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 STAU1O95793 577 aaKnown RBP21.69■■□□□ 1.06
ME3-212ENST00000543262 ZNF865P0CJ78 1059 aaPredicted RBP21.69■■□□□ 1.06
ME3-212ENST00000543262 RARGP13631 454 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 ATF7P17544 494 aaPredicted RBP21.69■■□□□ 1.06
ME3-212ENST00000543262 PSMA2P25787 234 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 CDC42EP1Q00587 391 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 HIC1Q14526 733 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 FOXR1Q6PIV2 292 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 SPOCD1Q6ZMY3 1216 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 RAPGEF5Q92565 580 aa21.69■■□□□ 1.06
ME3-212ENST00000543262 ZMAT2Q96NC0 199 aaKnown RBP21.69■■□□□ 1.06
ME3-212ENST00000543262 SCN1AP35498 2009 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 SMIM35A0A1B0GVV1 85 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 MBLAC1A4D2B0 266 aaPredicted RBP21.68■■□□□ 1.06
ME3-212ENST00000543262 EIF3HO15372 352 aaKnown RBP eCLIP21.68■■□□□ 1.06
ME3-212ENST00000543262 IVLP07476 585 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 GPD2P43304 727 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 MFSD10Q14728 455 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 CCL14Q16627 93 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 ODF2Q5BJF6 829 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 CCDC25Q86WR0 208 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 PLEKHA5Q9HAU0 1116 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 WDR35Q9P2L0 1181 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 HES2Q9Y543 173 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 A6NNZ2 444 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 TJP3O95049 919 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 HMGCRP04035 888 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 ADCY8P40145 1251 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 GUCY1A3Q02108 690 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 ZNF268Q14587 947 aaPredicted RBP21.68■■□□□ 1.06
ME3-212ENST00000543262 TUBB8Q3ZCM7 444 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 APBB1IPQ7Z5R6 666 aaPredicted RBP21.68■■□□□ 1.06
ME3-212ENST00000543262 ARFGAP1Q8N6T3 406 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 UBA3Q8TBC4 463 aa21.68■■□□□ 1.06
ME3-212ENST00000543262 METTL5Q9NRN9 209 aaKnown RBP21.68■■□□□ 1.06
ME3-212ENST00000543262 DDX56Q9NY93 547 aaKnown RBP21.68■■□□□ 1.06
ME3-212ENST00000543262 NOVA2Q9UNW9 492 aaKnown RBP21.68■■□□□ 1.06
ME3-212ENST00000543262 TRIP12Q14669 1992 aaPredicted RBP21.67■■□□□ 1.06
ME3-212ENST00000543262 ATF2P15336 505 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 VPS41P49754 854 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 COPS2P61201 443 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 MYO1EQ12965 1108 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 RHBDF2Q6PJF5 856 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 EMC1Q8N766 993 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 RALGAPA2Q2PPJ7 1873 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 LRRD1A4D1F6 860 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 DARSP14868 501 aaKnown RBP21.67■■□□□ 1.06
ME3-212ENST00000543262 ITGA8P53708 1063 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 GSCP56915 257 aaPredicted RBP21.67■■□□□ 1.06
ME3-212ENST00000543262 TAF1CQ15572 869 aaPredicted RBP21.67■■□□□ 1.06
ME3-212ENST00000543262 NOTUMQ6P988 496 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 ZNF365Q70YC5 407 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 FNIP1Q8TF40 1166 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 DNAJB3Q8WWF6 145 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 SNX27Q96L92 541 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 AAASQ9NRG9 546 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 DERAQ9Y315 318 aa21.67■■□□□ 1.06
ME3-212ENST00000543262 DCDC2CA8MYV0 355 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 PPEF2O14830 753 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 RIPK2O43353 540 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 LIASO43766 372 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 CYP3A5P20815 502 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 GABRB2P47870 512 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 ZNF157P51786 506 aaPredicted RBP21.66■■□□□ 1.06
ME3-212ENST00000543262 IRF5Q13568 498 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 TFDP3Q5H9I0 405 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 NT5C1AQ9BXI3 368 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 hCG_1818297A0A087WSY0 165 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 CAND2O75155 1236 aa21.66■■□□□ 1.06
ME3-212ENST00000543262 LRCH4O75427 683 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms