RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 NOLC1Q14978 699 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD4-209ENST00000542717 UBE2SQ16763 222 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 SDE2Q6IQ49 451 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 SLC8B1Q6J4K2 584 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 GAREM2Q75VX8 874 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 TRMT11Q7Z4G4 463 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 SRGAP1Q7Z6B7 1085 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 DNAJB7Q7Z6W7 309 aaPredicted RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 ITIH5Q86UX2 942 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 FAM114A1Q8IWE2 563 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 CMTM8Q8IZV2 173 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 MAB21L3Q8N8X9 362 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 DCBLD1Q8N8Z6 715 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 RDH13Q8NBN7 331 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 GSTCDQ8NEC7 633 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 PDCD6IPQ8WUM4 868 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 DNASE2BQ8WZ79 361 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 ARHGAP45Q92619 1136 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 IGSF8Q969P0 613 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 CPB2Q96IY4 423 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 YTHDC1Q96MU7 727 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 PGLYRP2Q96PD5 576 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 DEPDC7Q96QD5 511 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 SH2D3AQ9BRG2 576 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 ADNPQ9H2P0 1102 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 RNF41Q9H4P4 317 aaPredicted RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 RUBCNLQ9H714 662 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 PSTPIP2Q9H939 334 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 KIF9Q9HAQ2 790 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 ZNF71Q9NQZ8 489 aaPredicted RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 SEC63Q9UGP8 760 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 AFF4Q9UHB7 1163 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 FBXL5Q9UKA1 691 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 PCDHA6Q9UN73 950 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 CCL26Q9Y258 94 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 ANKRD6Q9Y2G4 727 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 PCDHA8Q9Y5H6 950 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 PCDHA10Q9Y5I2 948 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 ZFC3H1O60293 1989 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 CENPEQ02224 2701 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 MYO16Q9Y6X6 1858 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 PLXND1Q9Y4D7 1925 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 OTOGQ6ZRI0 2925 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 WDR64B1ANS9 1081 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 BTBD18B2RXH4 712 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 INO80B-WBP1J3KQ70 363 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 ZNF213O14771 459 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CYP26A1O43174 497 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 ADAM23O75077 832 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CSO75390 466 aaKnown RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 NPTXRO95502 500 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 NFATC1O95644 943 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CLDN1O95832 211 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 PRKCGP05129 697 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 PCP11498 1178 aaKnown RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 PRF1P14222 555 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 TRIM27P14373 513 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CKMT2P17540 419 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 WEE1P30291 646 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 AXLP30530 894 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 TNFSF9P41273 254 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CDR1P51861 262 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 MLLT10P55197 1068 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 C21orf59P57076 290 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CYP4F2P78329 520 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 DAB2P98082 770 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 KDSRQ06136 332 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CLN3Q13286 438 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 KCNAB2Q13303 367 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CLCA4Q14CN2 919 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 VEPH1Q14D04 833 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 TMEM132AQ24JP5 1023 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CEP55Q53EZ4 464 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 PRAMEF14Q5SWL7 426 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 IFIT1BQ5T764 474 aaKnown RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 ZNF280DQ6N043 979 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 RNF19BQ6ZMZ0 732 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 SV2AQ7L0J3 742 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CDR2LQ86X02 465 aaPredicted RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 PLA2G4DQ86XP0 818 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 EFCAB13Q8IY85 973 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 SMAP1Q8IYB5 467 aaPredicted RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 SLC34A3Q8N130 599 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CACTIN-AS1Q8N1I8 211 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 ARL14Q8N4G2 192 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 TMEM57Q8N5G2 664 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 ENAHQ8N8S7 591 aaPredicted RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 OSCP1Q8WVF1 389 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 USP13Q92995 863 aaPredicted RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 HPS3Q969F9 1004 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 CCDC51Q96ER9 411 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 RRP36Q96EU6 259 aaKnown RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 TOE1Q96GM8 510 aaKnown RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 ZSCAN10Q96SZ4 725 aaPredicted RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 PNKPQ96T60 521 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 JPH2Q9BR39 696 aaPredicted RBP3.6□□□□□ -1.83
CHD4-209ENST00000542717 ZNF577Q9BSK1 485 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 UBAC1Q9BSL1 405 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 SLC46A2Q9BY10 475 aa3.6□□□□□ -1.83
CHD4-209ENST00000542717 LRRC3Q9BY71 257 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms