RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 DLGAP3O95886 979 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 NCF2P19878 526 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-214ENST00000540109 DLG4P78352 724 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 EN1Q05925 392 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-214ENST00000540109 FLOT2Q14254 428 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 CDH24Q86UP0 819 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 CCDC103Q8IW40 242 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 SENP7Q9BQF6 1050 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 TRPV6Q9H1D0 765 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 KRT82Q9NSB4 513 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 PCDHA13Q9Y5I0 950 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 COMMD10Q9Y6G5 202 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 KANSL1LA0AUZ9 987 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 DPPA5A6NC42 116 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 SPATA31C1P0DKV0 1188 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 ATF2P15336 505 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 GRK2P25098 689 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 PRKCIP41743 596 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 FAPQ12884 760 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 TRIP10Q15642 601 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 TRMT5Q32P41 509 aaKnown RBP6.34□□□□□ -1.39
PTPRD-214ENST00000540109 PLEKHA7Q6IQ23 1121 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 TSHZ1Q6ZSZ6 1077 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 SFR1Q86XK3 245 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 REEP2Q9BRK0 252 aa6.34□□□□□ -1.39
PTPRD-214ENST00000540109 LSM14BQ9BX40 385 aaKnown RBP6.34□□□□□ -1.39
PTPRD-214ENST00000540109 A0A0A6YYK5 440 aaPredicted RBP6.34□□□□□ -1.4
PTPRD-214ENST00000540109 RHOBTB1O94844 696 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 UBOX5O94941 541 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 NR3C1P04150 777 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 CCND2P30279 289 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 NPEPPSP55786 919 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 TRMT1LQ7Z2T5 733 aaKnown RBP6.34□□□□□ -1.4
PTPRD-214ENST00000540109 PM20D2Q8IYS1 436 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 TTC30BQ8N4P2 665 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 DAPK2Q9UIK4 370 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 SNX24Q9Y343 169 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 TELO2Q9Y4R8 837 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 UBIAD1Q9Y5Z9 338 aa6.34□□□□□ -1.4
PTPRD-214ENST00000540109 EVPLLA8MZ36 301 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 FAM86B1E9PN63 330 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 KLHL2O95198 593 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 FAM86B2P0C5J1 330 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 DDX5P17844 614 aaKnown RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 CCR3P51677 355 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 PTK2BQ14289 1009 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 NOL9Q5SY16 702 aaKnown RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 CCSAPQ6IQ19 270 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 WDR59Q6PJI9 974 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 STX19Q8N4C7 294 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 RBM46Q8TBY0 533 aaKnown RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 GIPC2Q8TF65 315 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 KCNN1Q92952 543 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 SKA1Q96BD8 255 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 CCDC127Q96BQ5 260 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 ACCSQ96QU6 501 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 SLC38A10Q9HBR0 1119 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 TRPC7Q9HCX4 862 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 TRIM10Q9UDY6 481 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 FBXO40Q9UH90 709 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 HAO1Q9UJM8 370 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 RASSF9O75901 435 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 RAD17O75943 681 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 KITP10721 976 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 RAP1GAPP47736 663 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 RTP1P59025 263 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 PRAMEP78395 509 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 CXCL9Q07325 125 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 EPS8Q12929 822 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 TRIM25Q14258 630 aaKnown RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 SLC9A5Q14940 896 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 ACAP1Q15027 740 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 TRIP13Q15645 432 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 EXOC3L4Q17RC7 722 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 ZNF746Q6NUN9 644 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 POTEGQ6S5H5 508 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 IZUMO2Q6UXV1 221 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 TAS2R42Q7RTR8 314 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 SPATA4Q8NEY3 305 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 LRRC15Q8TF66 581 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 DDX50Q9BQ39 737 aaKnown RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 PLGRKTQ9HBL7 147 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 CYLDQ9NQC7 956 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 SAR1AQ9NR31 198 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 ZNF219Q9P2Y4 722 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 STOML2Q9UJZ1 356 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 SCAF8Q9UPN6 1271 aaKnown RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 WDR64B1ANS9 1081 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 TSC22D2O75157 780 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 BRAFP15056 766 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 ALDH5A1P51649 535 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 VCPP55072 806 aaKnown RBP6.33□□□□□ -1.4
PTPRD-214ENST00000540109 AMPD2Q01433 879 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 ITGA7Q13683 1181 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 ANO4Q32M45 955 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 SUPT20HL1Q3ZLR7 823 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 RINT1Q6NUQ1 792 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 B3GNT9Q6UX72 402 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 KCNK18Q7Z418 384 aa6.33□□□□□ -1.4
PTPRD-214ENST00000540109 SLC51AQ86UW1 340 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms