RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 OCA2Q04671 838 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 BTKQ06187 659 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 CDC20Q12834 499 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 RRP1BQ14684 758 aaKnown RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 NPTX1Q15818 432 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 TMEM266Q2M3C6 531 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 PLA2G4EQ3MJ16 856 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 BBS9Q3SYG4 887 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 LEXMQ3ZCV2 418 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 ZBED5Q49AG3 693 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 TAF1BQ53T94 588 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 ESCO1Q5FWF5 840 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 HABP4Q5JVS0 413 aaKnown RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 ZBTB41Q5SVQ8 909 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 SCARA3Q6AZY7 606 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 ZFP1Q6P2D0 407 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 TTC27Q6P3X3 843 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 RIPOR1Q6ZS17 1223 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 CAPN12Q6ZSI9 719 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 EEPD1Q7L9B9 569 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 PEX26Q7Z412 305 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 HDDC2Q7Z4H3 204 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 KRT77Q7Z794 578 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 GPR180Q86V85 440 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 SGMS1Q86VZ5 419 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 NME9Q86XW9 330 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 MB21D2Q8IYB1 491 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 CLYBLQ8N0X4 340 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 USHBP1Q8N6Y0 703 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 KBTBD3Q8NAB2 608 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 GALNT6Q8NCL4 622 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 GIMAP8Q8ND71 665 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 DENND1AQ8TEH3 1009 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 ANKRD49Q8WVL7 239 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 BAP1Q92560 729 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 KHSRPQ92945 711 aaKnown RBP eCLIP6.42□□□□□ -1.382e-12■■■□□ 16.9
SNHG1-211ENST00000539921 REXO5Q96IC2 774 aaKnown RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 CDHR1Q96JP9 859 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 TMEM87BQ96K49 555 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 SAMD11Q96NU1 681 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 ACAP3Q96P50 834 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 TUBA1CQ9BQE3 449 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 HERC2P3Q9BVR0 1158 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 SLC2A11Q9BYW1 496 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 WDR12Q9GZL7 423 aaKnown RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 EHMT1Q9H9B1 1298 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 SYTL2Q9HCH5 934 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 NPDC1Q9NQX5 325 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 AGPAT5Q9NUQ2 364 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 PARVAQ9NVD7 372 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 DDX56Q9NY93 547 aaKnown RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 NPAP1Q9NZP6 1156 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 WHRNQ9P202 907 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 KIF17Q9P2E2 1029 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 GRID1Q9ULK0 1009 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 PLA2G4CQ9UP65 541 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 ATP11BQ9Y2G3 1177 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 WASF2Q9Y6W5 498 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 MN1Q10571 1320 aaPredicted RBP6.42□□□□□ -1.38
SNHG1-211ENST00000539921 SYNGAP1Q96PV0 1343 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 MON2Q7Z3U7 1717 aa6.42□□□□□ -1.38
SNHG1-211ENST00000539921 NWD1Q149M9 1564 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 KLF18A0A0U1RQI7 1052 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 LINC00854A0A1B0GVQ3 168 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 MAGEB16A2A368 324 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 KRBA1A5PL33 1030 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 OR5K3A6NET4 321 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 TRIM64A6NGJ6 449 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 TRIM75PA6NK02 468 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 FAM196BA6NMK8 535 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 CFAP99D6REC4 459 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 ENPP3O14638 875 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 NCK2O43639 380 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 FAM189A1O60320 539 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 KPNA6O60684 536 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 GCATO75600 419 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 B3GALNT1O75752 331 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 MAP3K6O95382 1288 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 PGM3O95394 542 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 CBX6O95503 412 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 ZBTB11O95625 1053 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-211ENST00000539921 RPN1P04843 607 aaKnown RBP6.41□□□□□ -1.38
SNHG1-211ENST00000539921 CYP1A2P05177 515 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 KRT5P13647 590 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 IFNAR1P17181 557 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 PRKCAP17252 672 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 ATF7P17544 494 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-211ENST00000539921 PLCG1P19174 1290 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 MZF1P28698 734 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-211ENST00000539921 RFC1P35251 1148 aaPredicted RBP6.41□□□□□ -1.38
SNHG1-211ENST00000539921 TUFMP49411 452 aaKnown RBP6.41□□□□□ -1.38
SNHG1-211ENST00000539921 IST1P53990 364 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 HADHBP55084 474 aaKnown RBP6.41□□□□□ -1.38
SNHG1-211ENST00000539921 NCKAP1LP55160 1127 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 STX17P56962 302 aa6.41□□□□□ -1.38
SNHG1-211ENST00000539921 TXNL4AP83876 142 aaKnown RBP6.41□□□□□ -1.38
SNHG1-211ENST00000539921 PPP2R2BQ00005 443 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms