RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ESYT3A0FGR9 886 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 FAM155AB1AL88 458 aaPredicted RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 H3BQF6 201 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 M0QYV0 167 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 O00370 1275 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 SEPT4O43236 478 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 DAPK3O43293 454 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 RNF40O75150 1001 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 RNF8O76064 485 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 MICAL2O94851 1124 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 ERBB2P04626 1255 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 C6orf222P0C671 652 aaPredicted RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 RARAP10276 462 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 CYBAP13498 195 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 ITIH2P19823 946 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 HOXD10P28358 340 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 SCNN1AP37088 669 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 GGCXP38435 758 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 PTGIRP43119 386 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 SSR1P43307 286 aaKnown RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 MARCKSL1P49006 195 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 CDR1P51861 262 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 PSMC1P62191 440 aaKnown RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 DENND1BQ6P3S1 775 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 DRICH1Q6PGQ1 229 aaPredicted RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 ALKAL1Q6UXT8 129 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 FAM43BQ6ZT52 329 aaPredicted RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 DPH6Q7L8W6 267 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 IQCKQ8N0W5 287 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 CCDC89Q8N998 374 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 TTC13Q8NBP0 860 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 ATL2Q8NHH9 583 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 FAM76AQ8TAV0 307 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 TFAP2BQ92481 460 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 ELMO3Q96BJ8 720 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 HEXIM2Q96MH2 286 aaKnown RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 MCEEQ96PE7 176 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 CELF4Q9BZC1 486 aaKnown RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 OSBPL8Q9BZF1 889 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 FOXP3Q9BZS1 431 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 SMYD3Q9H7B4 428 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 ASNSD1Q9NWL6 643 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 WHRNQ9P202 907 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 ABT1Q9ULW3 272 aaKnown RBP10.74□□□□□ -0.69
SPARC-209ENST00000539687 GINS2Q9Y248 185 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 KAT6AQ92794 2004 aa10.74□□□□□ -0.69
SPARC-209ENST00000539687 GOLGA6CA6NDK9 693 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 HMGB1P1B2RPK0 211 aaPredicted RBP10.73□□□□□ -0.69
SPARC-209ENST00000539687 TREHO43280 583 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 PPFIA2O75334 1257 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 CSDE1O75534 798 aaKnown RBP10.73□□□□□ -0.69
SPARC-209ENST00000539687 CABYRO75952 493 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 RECQL4O94761 1208 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 SYF2O95926 243 aaKnown RBP10.73□□□□□ -0.69
SPARC-209ENST00000539687 KRT1P04264 644 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 GOLGA6DP0CG33 693 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 SKIP12755 728 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 PSMA2P25787 234 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 ECHS1P30084 290 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 PCK1P35558 622 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 PSMC4P43686 418 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 RAP1GAPP47736 663 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 TAF6P49848 677 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 GUCY2FP51841 1108 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 NDST1P52848 882 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 SLC8A3P57103 927 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 MRPS6P82932 125 aaKnown RBP10.73□□□□□ -0.69
SPARC-209ENST00000539687 NFX1Q12986 1120 aaKnown RBP10.73□□□□□ -0.69
SPARC-209ENST00000539687 NOGQ13253 232 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 PDCLQ13371 301 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 PTK6Q13882 451 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 CCL14Q16627 93 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 DEFB115Q30KQ5 88 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 FBXO47Q5MNV8 452 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 ZFYVE27Q5T4F4 411 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 ARHGAP17Q68EM7 881 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 ZNF365Q70YC5 407 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 HOOK3Q86VS8 718 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 WDTC1Q8N5D0 677 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 ARFGAP2Q8N6H7 521 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 PCSK9Q8NBP7 692 aaKnown RBP10.73□□□□□ -0.69
SPARC-209ENST00000539687 MCRS1Q96EZ8 462 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 TNIP3Q96KP6 325 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 ELOVL4Q9GZR5 314 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 SDCBP2Q9H190 292 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 GDAP2Q9NXN4 497 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 GOLGA6AQ9NYA3 693 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 CHORDC1Q9UHD1 332 aaPredicted RBP10.73□□□□□ -0.69
SPARC-209ENST00000539687 GTF2IRD1Q9UHL9 959 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 USTQ9Y2C2 406 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 FAN1Q9Y2M0 1017 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 EVPLQ92817 2033 aa10.73□□□□□ -0.69
SPARC-209ENST00000539687 ZSCAN5CA6NGD5 496 aaPredicted RBP10.72□□□□□ -0.69
SPARC-209ENST00000539687 PIRO00625 290 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 GPR182O15218 404 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
SPARC-209ENST00000539687 CAND2O75155 1236 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 CALCAP01258 141 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 CFHP08603 1231 aa10.72□□□□□ -0.69
SPARC-209ENST00000539687 MYZAPP0CAP1 466 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms