RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 LHX1P48742 406 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 CACNA2D1P54289 1103 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 FKBP3Q00688 224 aaKnown RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 MYL7Q01449 175 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 LRRC63Q05C16 580 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 DDR2Q16832 855 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 IER5LQ5T953 404 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 DPH6Q7L8W6 267 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 DNAJB7Q7Z6W7 309 aaPredicted RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 OR6B3Q8NGW1 331 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 SHKBP1Q8TBC3 707 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 MYLPFQ96A32 169 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 ACSF2Q96CM8 615 aaPredicted RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 ZNF512Q96ME7 567 aaPredicted RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 TWNKQ96RR1 684 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 TSG101Q99816 390 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 OXCT2Q9BYC2 517 aaPredicted RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 PLA2G2FQ9BZM2 168 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 VRTNQ9H8Y1 702 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 RAPGEFL1Q9UHV5 662 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 CDH7Q9ULB5 785 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 MAFFQ9ULX9 164 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 MRPS23Q9Y3D9 190 aaKnown RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 GREB1Q4ZG55 1949 aa11.46□□□□□ -0.58
HMGA2-209ENST00000539662 OBSL1O75147 1896 aa11.46□□□□□ -0.58
HMGA2-209ENST00000539662 A0A1W2PRU2 124 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 CLDN5O00501 218 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 PSMA7O14818 248 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 TACC1O75410 805 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 EPB41P11171 864 aaKnown RBP11.45□□□□□ -0.58
HMGA2-209ENST00000539662 KRT13P13646 458 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 PIK3CAP42336 1068 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 ALDH1A3P47895 512 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 AP3M2P53677 418 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 EPHA5P54756 1037 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 TNNC1P63316 161 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 TSPY1Q01534 308 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 HTR4Q13639 388 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 TEAD2Q15562 447 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 DPCR1Q3MIW9 517 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 DCAF17Q5H9S7 520 aaPredicted RBP11.45□□□□□ -0.58
HMGA2-209ENST00000539662 ZNF667Q5HYK9 610 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 MDH1BQ5I0G3 518 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 GAREM2Q75VX8 874 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 RTL10Q7L3V2 364 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 DCP1BQ8IZD4 617 aaKnown RBP11.45□□□□□ -0.58
HMGA2-209ENST00000539662 EDAQ92838 391 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 TATDN2Q93075 761 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 SLC35C1Q96A29 364 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 SYAP1Q96A49 352 aaPredicted RBP11.45□□□□□ -0.58
HMGA2-209ENST00000539662 PCED1BQ96HM7 432 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 LRFN3Q9BTN0 628 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 MKNK1Q9BUB5 465 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 SNX25Q9H3E2 840 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 IL21Q9HBE4 155 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 TMEM8AQ9HCN3 771 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 AVENQ9NQS1 362 aaPredicted RBP11.45□□□□□ -0.58
HMGA2-209ENST00000539662 PCDHB5Q9Y5E4 795 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 NUMBLQ9Y6R0 609 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 DENND4CQ5VZ89 1909 aa11.45□□□□□ -0.58
HMGA2-209ENST00000539662 A8MXQ7 604 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 ANHXE9PGG2 379 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 SLC16A3O15427 465 aaKnown RBP11.44□□□□□ -0.58
HMGA2-209ENST00000539662 CLSTN1O94985 981 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 ALADP13716 330 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 HMGA1P17096 107 aaKnown RBP11.44□□□□□ -0.58
HMGA2-209ENST00000539662 PTPN1P18031 435 aaKnown RBP11.44□□□□□ -0.58
HMGA2-209ENST00000539662 BDNFP23560 247 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 FCARP24071 287 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 EPHB3P54753 998 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 CYP27A1Q02318 531 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 PAK1Q13153 545 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 PLD1Q13393 1074 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 SGSM1Q2NKQ1 1148 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 TCERG1LQ5VWI1 586 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 TANGO2Q6ICL3 276 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 TRIM67Q6ZTA4 783 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 PAQR9Q6ZVX9 377 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 PDZD4Q76G19 769 aaPredicted RBP11.44□□□□□ -0.58
HMGA2-209ENST00000539662 FILIP1Q7Z7B0 1213 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 TMEM150AQ86TG1 271 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 SLC44A3Q8N4M1 653 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 FAM200AQ8TCP9 573 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 SPPL2BQ8TCT7 592 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 PSMG2Q969U7 264 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 RSPRY1Q96DX4 576 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 ASIC4Q96FT7 647 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 ARID3AQ99856 593 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 KXD1Q9BQD3 176 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 SRRTQ9BXP5 876 aaKnown RBP11.44□□□□□ -0.58
HMGA2-209ENST00000539662 B3GNT5Q9BYG0 378 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 ZNF518BQ9C0D4 1074 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 NUP62CLQ9H1M0 184 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.587e-8■■□□□ 11.7
HMGA2-209ENST00000539662 CDH9Q9ULB4 789 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 SORCS3Q9UPU3 1222 aa11.44□□□□□ -0.58
HMGA2-209ENST00000539662 GPR37L1O60883 481 aa11.43□□□□□ -0.58
HMGA2-209ENST00000539662 CD58P19256 250 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms