RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CARD9Q9H257 536 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 MPP6Q9NZW5 540 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 APPL1Q9UKG1 709 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CEP170BQ9Y4F5 1589 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 MYO5BQ9ULV0 1848 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CCDC78A2IDD5 438 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 TRPC5OSA6NMA1 111 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 EVPLLA8MZ36 301 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 OGTO15294 1046 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 TCF7P36402 384 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 NEK2P51955 445 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 KDSRQ06136 332 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 POLD3Q15054 466 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 TRPM8Q7Z2W7 1104 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 LONP2Q86WA8 852 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PCMTD2Q9NV79 361 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 WHRNQ9P202 907 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 C2orf81A6NN90 581 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 LRG1P02750 347 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 MAPTP10636 758 aaKnown RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CNTFP26441 200 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PPP3CCP48454 512 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 TMEM62Q0P6H9 643 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 DMC1Q14565 340 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 Q4G0T1 1027 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 LVRNQ6Q4G3 990 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 UNC45BQ8IWX7 931 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 VPS37AQ8NEZ2 397 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ANKS1AQ92625 1134 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 NAT9Q9BTE0 207 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 UBQLN1Q9UMX0 589 aaKnown RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ZBTB12Q9Y330 459 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 SRP72O76094 671 aaKnown RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 EGFRP00533 1210 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 HOXC6P09630 235 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 VDRP11473 427 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 GMPSP49915 693 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 GEMP55040 296 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 HIST2H2ACQ16777 129 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 HIST2H2AA3Q6FI13 130 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF518BQ9C0D4 1074 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 BATF3Q9NR55 127 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 GIMAP4Q9NUV9 329 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 TMEM51Q9NW97 253 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 H2AFY2Q9P0M6 372 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PPP2R3BQ9Y5P8 575 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 SOAT2O75908 522 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 SERPIND1P05546 499 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CTSHP09668 335 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PON1P27169 355 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 LSP1P33241 339 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 SREBF1P36956 1147 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ANXA11P50995 505 aaKnown RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ITGA8P53708 1063 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PRKCQQ04759 706 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 USP33Q8TEY7 942 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 GMCL1Q96IK5 515 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 FAR2Q96K12 515 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PRPF18Q99633 342 aaKnown RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 TRIM51Q9BSJ1 452 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CINPQ9BW66 212 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 KCNF1Q9H3M0 494 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CTDNEP1O95476 244 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 FAM107AO95990 144 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 GSNP06396 782 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PRLRP16471 622 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 RGS2P41220 211 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 PTGER2P43116 358 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 GCLCP48506 637 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ARL4DP49703 201 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 DAB2P98082 770 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 COBLL1Q53SF7 1204 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 IPMKQ8NFU5 416 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 OTULINQ96BN8 352 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 MANSC1Q9H8J5 431 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 LATS2Q9NRM7 1088 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CHMP2BQ9UQN3 213 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ATICP31939 592 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF177Q13360 481 aaPredicted RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 E2F4Q16254 413 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 ZRANB3Q5FWF4 1079 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 LRRC71Q8N4P6 559 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 C17orf80Q9BSJ5 609 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 CCDC134Q9H6E4 229 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 RBM12Q9NTZ6 932 aaKnown RBP6.75□□□□□ -1.33
LSAMP-207ENST00000539563 SCN3BQ9NY72 215 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 TRIM10Q9UDY6 481 aa6.75□□□□□ -1.33
LSAMP-207ENST00000539563 HOXA2O43364 376 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RBP3P10745 1247 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 BRD2P25440 801 aaKnown RBP6.74□□□□□ -1.33
LSAMP-207ENST00000539563 NCKAP1LP55160 1127 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 LRRC74AQ0VAA2 488 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 KIZQ2M2Z5 673 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 MDH1BQ5I0G3 518 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 C10orf120Q5SQS8 335 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 ICE2Q659A1 982 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 RFX8Q6ZV50 586 aa6.74□□□□□ -1.33
LSAMP-207ENST00000539563 HORMAD1Q86X24 394 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms