RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 COL1A2P08123 1366 aa9.77□□□□□ -0.84
DDB1-211ENST00000538280 RBM47A0AV96 593 aaKnown RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 E7EVH7 732 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 RGS16O15492 202 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 MEFVO15553 781 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 LIASO43766 372 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 GJB6O95452 261 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 PGK2P07205 417 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 MCF2P10911 925 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 ATF2P15336 505 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 DRD4P21917 467 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 BRD2P25440 801 aaKnown RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 MARK3P27448 753 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 TMOD1P28289 359 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 CHKAP35790 457 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 MAGEA10P43363 369 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 ITGA8P53708 1063 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 ARHGAP1Q07960 439 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 PIGHQ14442 188 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 TAZQ16635 292 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 AMHR2Q16671 573 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 FAM110CQ1W6H9 321 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 ZNF699Q32M78 642 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 ZNF484Q5JVG2 852 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 HIBCHQ6NVY1 386 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 DNAJC24Q6P3W2 148 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 FASTKD5Q7L8L6 764 aaKnown RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 EEPD1Q7L9B9 569 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 PHLDB2Q86SQ0 1253 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 TADA2BQ86TJ2 420 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 FBXO16Q8IX29 292 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 DHX37Q8IY37 1157 aaKnown RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 C10orf67Q8IYJ2 551 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 CCDC89Q8N998 374 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 CXorf38Q8TB03 319 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 EPS8L3Q8TE67 593 aaKnown RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 FNIP1Q8TF40 1166 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 GTF3C2Q8WUA4 911 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 TFAP2BQ92481 460 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 FAM212AQ96EL1 285 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 ANKRD36BP1Q96IX9 119 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 SPATA33Q96N06 139 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 ZNF317Q96PQ6 595 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 TRAIPQ9BWF2 469 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 STMN4Q9H169 189 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 RABEP2Q9H5N1 569 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 FAM124BQ9H5Z6 455 aaPredicted RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 DDX56Q9NY93 547 aaKnown RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 EURLQ9NYK6 297 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 ASIC3Q9UHC3 531 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 LGALS13Q9UHV8 139 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 DRG1Q9Y295 367 aaKnown RBP9.77□□□□□ -0.85
DDB1-211ENST00000538280 EFR3BQ9Y2G0 817 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 SLC45A1Q9Y2W3 748 aa9.77□□□□□ -0.85
DDB1-211ENST00000538280 MCM3APO60318 1980 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 hCG_1818297A0A087WSY0 165 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 ASB14A6NK59 587 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 NOP56O00567 594 aaKnown RBP9.76□□□□□ -0.85
DDB1-211ENST00000538280 RASGRF2O14827 1237 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 STAU1O95793 577 aaKnown RBP9.76□□□□□ -0.85
DDB1-211ENST00000538280 TTC4O95801 387 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 TNNC2P02585 160 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 ABHD2P08910 425 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 SRGAP2CP0DJJ0 459 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 CHN1P15882 459 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 CD58P19256 250 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 CETN2P41208 172 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 RPL7AP62424 266 aaKnown RBP9.76□□□□□ -0.85
DDB1-211ENST00000538280 IFI35P80217 286 aaPredicted RBP9.76□□□□□ -0.85
DDB1-211ENST00000538280 LMNB2Q03252 620 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 TRPC3Q13507 836 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 SNX1Q13596 522 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 KCTD2Q14681 263 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 OASLQ15646 514 aaKnown RBP9.76□□□□□ -0.85
DDB1-211ENST00000538280 QPCTQ16769 361 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 DAB2IPQ5VWQ8 1189 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 DENND1BQ6P3S1 775 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 MAMDC4Q6UXC1 1216 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 MFSD7Q6UXD7 560 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 SPOCD1Q6ZMY3 1216 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 CEP128Q6ZU80 1094 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 POLNQ7Z5Q5 900 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 NECAB2Q7Z6G3 386 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 RHPN2Q8IUC4 686 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 CCDC50Q8IVM0 306 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 DEFB123Q8N688 67 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 CEP120Q8N960 986 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 CCHCR1Q8TD31 782 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 PPM1EQ8WY54 764 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 COPS5Q92905 334 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 NKD2Q969F2 451 aaPredicted RBP9.76□□□□□ -0.85
DDB1-211ENST00000538280 TCHPQ9BT92 498 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 SDCBP2Q9H190 292 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 PPANQ9NQ55 473 aaKnown RBP9.76□□□□□ -0.85
DDB1-211ENST00000538280 NINJ2Q9NZG7 142 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 SIX4Q9UIU6 781 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 ANAPC5Q9UJX4 755 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 GJD2Q9UKL4 321 aa9.76□□□□□ -0.85
DDB1-211ENST00000538280 STRIP2Q9ULQ0 834 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms