RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SLITRK1Q96PX8 696 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 FAM107BQ9H098 131 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 PTPN22Q9Y2R2 807 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 KPNA6O60684 536 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 CD4P01730 458 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 PSMA2P25787 234 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 PSMC1P62191 440 aaKnown RBP14.32□□□□□ -0.12
SMG6-203ENST00000536871 GNGT1P63211 74 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 C2CD6Q53TS8 623 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 LCLAT1Q6UWP7 414 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 PHLDB2Q86SQ0 1253 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 UNC93AQ86WB7 457 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 RELL1Q8IUW5 271 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 MCRS1Q96EZ8 462 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 CCDC114Q96M63 670 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 PTPN18Q99952 460 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 CHST7Q9NS84 486 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 ASNSD1Q9NWL6 643 aa14.32□□□□□ -0.12
SMG6-203ENST00000536871 O00370 1275 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 DYNC1LI2O43237 492 aaPredicted RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 RNF8O76064 485 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 RPLP2P05387 115 aaKnown RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 SMIM10L2AP0DMW4 78 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 SMIM10L2BP0DMW5 78 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 DARSP14868 501 aaKnown RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 ATP5DP30049 168 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 RGS2P41220 211 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 PNPLA4P41247 253 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 KCNJ1P48048 391 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 MKRN3Q13064 507 aaKnown RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 PTPN20Q4JDL3 420 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 ICE2Q659A1 982 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 RHBDF2Q6PJF5 856 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 LRRC31Q6UY01 552 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 SPOCD1Q6ZMY3 1216 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 SPATS2Q86XZ4 545 aaKnown RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 SNX27Q96L92 541 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 HEXIM2Q96MH2 286 aaKnown RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 AP5M1Q9H0R1 490 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 UBQLN1Q9UMX0 589 aaKnown RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 SMAPO00193 183 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 GPR32O75388 356 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 MICAL2O94851 1124 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 AGTP01019 485 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 CYP2C9P11712 490 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 PCK1P35558 622 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 ADCY8P40145 1251 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 MDH1P40925 334 aaKnown RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 MFSD10Q14728 455 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 TLK2Q86UE8 772 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 XYLT1Q86Y38 959 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 ZDHHC17Q8IUH5 632 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 NKD2Q969F2 451 aaPredicted RBP14.31□□□□□ -0.12
SMG6-203ENST00000536871 ZBTB10Q96DT7 871 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 ELOVL4Q9GZR5 314 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 SDCBP2Q9H190 292 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 SMYD3Q9H7B4 428 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 SETD4Q9NVD3 440 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 RSPH14Q9UHP6 348 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 ANAPC5Q9UJX4 755 aa14.31□□□□□ -0.12
SMG6-203ENST00000536871 hCG_1818297A0A087WSY0 165 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 M0QYV0 167 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 MYO1CO00159 1063 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 HAS3O00219 553 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 RIPK2O43353 540 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 ITGAVP06756 1048 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 FAM163BP0C2L3 166 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 GPD2P43304 727 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 PPP2R2AP63151 447 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 PDCLQ13371 301 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 SNX1Q13596 522 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 LLGL2Q6P1M3 1020 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 STK32AQ8WU08 396 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 TLCD1Q96CP7 247 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 ZNF560Q96MR9 790 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 TRIM6Q9C030 488 aaPredicted RBP14.3□□□□□ -0.12
SMG6-203ENST00000536871 PHACTR1Q9C0D0 580 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 CENPHQ9H3R5 247 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 NEU2Q9Y3R4 380 aa14.3□□□□□ -0.12
SMG6-203ENST00000536871 F8VP50 259 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 MEFVO15553 781 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 LIASO43766 372 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 NPTXRO95502 500 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 ZNF865P0CJ78 1059 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 IVDP26440 423 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 HOXA11P31270 313 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 SSTR3P32745 418 aaPredicted RBP14.29□□□□□ -0.12
SMG6-203ENST00000536871 RAP1GAPP47736 663 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 PSEN2P49810 448 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 NDST1P52848 882 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 CDH8P55286 799 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 ZNF252P-AS1Q0IIN9 211 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 ZBTB6Q15916 424 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 KIZQ2M2Z5 673 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 MFSD5Q6N075 450 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 TAOK1Q7L7X3 1001 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 GSTA5Q7RTV2 222 aa14.29□□□□□ -0.12
SMG6-203ENST00000536871 PCGF5Q86SE9 256 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms