RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ZNF132P52740 706 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 ARPP19P56211 112 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 TBX2Q13207 712 aaPredicted RBP16.59■□□□□ 0.25
CNN1-202ENST00000535659 GPR17Q13304 367 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 RAB33AQ14088 237 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 DRC7Q8IY82 874 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 B3GALNT2Q8NCR0 500 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 LPIN3Q9BQK8 851 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 CRTAC1Q9NQ79 661 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 LMCD1Q9NZU5 365 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 TRANK1O15050 2925 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 VWA8A3KMH1 1905 aa16.59■□□□□ 0.25
CNN1-202ENST00000535659 TPM1P09493 284 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 OR4Q2P0C623 313 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 PNMA6AP0CW24 399 aaPredicted RBP16.58■□□□□ 0.24
CNN1-202ENST00000535659 CPB1P15086 417 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 KLRC2P26717 231 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 CLCN1P35523 988 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 BPIFB4P59827 614 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 PSMC1P62191 440 aaKnown RBP16.58■□□□□ 0.24
CNN1-202ENST00000535659 ZBED6P86452 979 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 MAPRE1Q15691 268 aaKnown RBP16.58■□□□□ 0.24
CNN1-202ENST00000535659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.58■□□□□ 0.24
CNN1-202ENST00000535659 GLYCTKQ8IVS8 523 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 ZNF461Q8TAF7 563 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 PKMYT1Q99640 499 aa16.58■□□□□ 0.24
CNN1-202ENST00000535659 NUCKS1Q9H1E3 243 aaKnown RBP16.58■□□□□ 0.24
CNN1-202ENST00000535659 COL4A4P53420 1690 aaPredicted RBP16.57■□□□□ 0.24
CNN1-202ENST00000535659 GFPT2O94808 682 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 ABLIM3O94929 683 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 ADH1AP07327 375 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 VDRP11473 427 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 ROR1Q01973 937 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 PTK2Q05397 1052 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 SMARCB1Q12824 385 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 NFE2Q16621 373 aaPredicted RBP16.57■□□□□ 0.24
CNN1-202ENST00000535659 SLC39A12Q504Y0 691 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 TPGS2Q68CL5 300 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 PALB2Q86YC2 1186 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 FMNL3Q8IVF7 1028 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 C12orf29Q8N999 325 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 FAM161BQ96MY7 647 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 TMLHEQ9NVH6 421 aa16.57■□□□□ 0.24
CNN1-202ENST00000535659 LRRC53A6NM62 1247 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 CCDC172P0C7W6 258 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 CD19P15391 556 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 POU3F3P20264 500 aaPredicted RBP16.56■□□□□ 0.24
CNN1-202ENST00000535659 KRT9P35527 623 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 MDH1BQ5I0G3 518 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 SFMBT2Q5VUG0 894 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 CYFIP2Q96F07 1278 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 TLE6Q9H808 572 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 AIPL1Q9NZN9 384 aa16.56■□□□□ 0.24
CNN1-202ENST00000535659 WDR27A2RRH5 827 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 C1RP00736 705 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 FERP16591 822 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 ARID5AQ03989 594 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 SGO2Q562F6 1265 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 LILRA6Q6PI73 481 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 RNF19BQ6ZMZ0 732 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 C4orf50Q6ZRC1 276 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 IRF2BP2Q7Z5L9 587 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 RBM23Q86U06 439 aaKnown RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 SLC47A2Q86VL8 602 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 OR8K1Q8NGG5 319 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 ZNF606Q8WXB4 792 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 TFAP2BQ92481 460 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 ANP32BQ92688 251 aaKnown RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 SYN2Q92777 582 aaPredicted RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 PCED1BQ96HM7 432 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 HNRNPABQ99729 332 aaKnown RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 B3GNT5Q9BYG0 378 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 ACP6Q9NPH0 428 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 IMPACTQ9P2X3 320 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 AFF4Q9UHB7 1163 aaKnown RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 MAFFQ9ULX9 164 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 PCDHB5Q9Y5E4 795 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 A0A0C4DFX4 3053 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 AKR1B15C9JRZ8 316 aaPredicted RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 PER2O15055 1255 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 CLASP2O75122 1294 aaKnown RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 CALCAP01258 141 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 ATF2P15336 505 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 GNA15P30679 374 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 CDR1P51861 262 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 ADKP55263 362 aaKnown RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 CYP27A1Q02318 531 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 CNGA2Q16280 664 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 CCDC142Q17RM4 750 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 ARHGAP17Q68EM7 881 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 ADGRD2Q7Z7M1 963 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 SPATA2LQ8IUW3 424 aaPredicted RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 C2orf15Q8WU43 125 aaKnown RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 PPP2R3CQ969Q6 453 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 MYLPFQ96A32 169 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 NSUN3Q9H649 340 aaKnown RBP16.55■□□□□ 0.24
CNN1-202ENST00000535659 FAM49BQ9NUQ9 324 aa16.55■□□□□ 0.24
CNN1-202ENST00000535659 MTCH2Q9Y6C9 303 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms