RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-213ENST00000534532 FMR1Q06787 632 aaKnown RBP eCLIP16.42■□□□□ 0.223e-7■■□□□ 14.4
NCAPD3-213ENST00000534532 GRB10Q13322 594 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 CARNMT1Q8N4J0 409 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 HASPINQ8TF76 798 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 C20orf96Q9NUD7 363 aaPredicted RBP16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 MSRAQ9UJ68 235 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 SLC12A8A0AV02 714 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 FKTNO75072 461 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 MCF2P10911 925 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 SPRP35270 261 aaPredicted RBP16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 PTGER2P43116 358 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 ARFIP2P53365 341 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 VGLL4Q14135 290 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 CCDC144BQ3MJ40 725 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 FBXO47Q5MNV8 452 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 THOC1Q96FV9 657 aaKnown RBP16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 CHCHD3Q9NX63 227 aaKnown RBP16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 PSD3Q9NYI0 1048 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 PCDHB5Q9Y5E4 795 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 CASTOR2A6NHX0 329 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 GYG2O15488 501 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 OCM2P0CE71 109 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 OCMP0CE72 109 aaPredicted RBP16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 VCLP18206 1134 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 MAGOHP61326 146 aaKnown RBP16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 IKBKEQ14164 716 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 CBWD2Q8IUF1 395 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 WDR49Q8IV35 697 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 PKD2L2Q9NZM6 624 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 CD274Q9NZQ7 290 aa16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 DBR1Q9UK59 544 aaKnown RBP16.42■□□□□ 0.22
NCAPD3-213ENST00000534532 CHUKO15111 745 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 CHRM3P20309 590 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 EFEMP1Q12805 493 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 OVOS1Q6IE37 1185 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 SNX31Q8N9S9 440 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 FAM163AQ96GL9 167 aaPredicted RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 ACTR5Q9H9F9 607 aaPredicted RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 GIMAP4Q9NUV9 329 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 C2orf81A6NN90 581 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 SPAG6O75602 509 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 VIL1P09327 827 aaKnown RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 CKBP12277 381 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 GEMP55040 296 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 PREPLQ4J6C6 727 aaPredicted RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 C3orf67Q6ZVT6 689 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 TMC2Q8TDI7 906 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 FOXP3Q9BZS1 431 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 STX18Q9P2W9 335 aaKnown RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 TRPV2Q9Y5S1 764 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 PTPRAP18433 802 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 PPP3CCP48454 512 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 FKBP1BP68106 108 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 EPC2Q52LR7 807 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 CIPCQ9C0C6 399 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 C5orf58C9J3I9 102 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 ATP5HO75947 161 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 HIST2H2ACQ16777 129 aaPredicted RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 CCDC157Q569K6 752 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 HIST2H2AA3Q6FI13 130 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 ZNF410Q86VK4 478 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 SENP6Q9GZR1 1112 aaPredicted RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 RUBCNLQ9H714 662 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 ZFP69BQ9UJL9 534 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 HAUS5O94927 633 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 POMCP01189 267 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 TIGD7Q6NT04 549 aaPredicted RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 HTATIP2Q9BUP3 242 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 TLR8Q9NR97 1041 aaKnown RBP16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 VPS28Q9UK41 221 aa16.41■□□□□ 0.22
NCAPD3-213ENST00000534532 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 PDCLQ13371 301 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 SYCP2LQ5T4T6 812 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 RASIP1Q5U651 963 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 APOBEC3HQ6NTF7 200 aaKnown RBP16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 UGT3A1Q6NUS8 523 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 SLC27A1Q6PCB7 646 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 NIPA1Q7RTP0 329 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 HIPK4Q8NE63 616 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 TFB1MQ8WVM0 346 aaKnown RBP16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 RBM15Q96T37 977 aaKnown RBP eCLIP16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 ITGA11Q9UKX5 1188 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 BCORL1Q5H9F3 1711 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 COMTP21964 271 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 IGFBP4P22692 258 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 GRAMD1BQ3KR37 738 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 ACAD10Q6JQN1 1059 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 ADA2Q9NZK5 511 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 LRRIQ1Q96JM4 1722 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 ATP1A1P05023 1023 aaKnown RBP16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 SMTNL2Q2TAL5 461 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 AGPAT5Q9NUQ2 364 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 GTF3C4Q9UKN8 822 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 RHOCP08134 193 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 PDE1CQ14123 709 aaPredicted RBP16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 ZNF284Q2VY69 593 aa16.4■□□□□ 0.22
NCAPD3-213ENST00000534532 PATL1Q86TB9 770 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms