RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	GAREM2	Q75VX8	874 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PRR18	Q8N4B5	295 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TRPV1	Q8NER1	839 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	OR14C36	Q8NHC7	312 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PRMT6	Q96LA8	375 aa	Predicted RBP	5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	POLR3GL	Q9BT43	218 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SARG	Q9BW04	601 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ACE2	Q9BYF1	805 aa	Predicted RBP	5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	OR10A5	Q9H207	317 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	C1orf112	Q9NSG2	853 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FTSJ1	Q9UET6	329 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	LIMCH1	Q9UPQ0	1083 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SLC45A1	Q9Y2W3	748 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	OAS3	Q9Y6K5	1087 aa	Known RBP	5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ABCA2	Q9BZC7	2435 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442		A0A1B0GUL6	1792 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442		A0A0A6YYK5	440 aa	Predicted RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CTNND1	O60716	968 aa	Known RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TOP3B	O95985	862 aa	Known RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	NCAM1	P13591	858 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	AOC1	P19801	751 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	APEX1	P27695	318 aa	Known RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	GLRB	P48167	497 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	EIF4A2	Q14240	407 aa	Known RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RTP5	Q14D33	572 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ADRM1	Q16186	407 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ANO4	Q32M45	955 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	UAP1L1	Q3KQV9	507 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PPP4R4	Q6NUP7	873 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	USP45	Q70EL2	814 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FASTKD5	Q7L8L6	764 aa	Known RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CHST15	Q7LFX5	561 aa	Predicted RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PPP1R42	Q7Z4L9	355 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ZC3H18	Q86VM9	953 aa	Known RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ZSWIM9	Q86XI8	627 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SVIP	Q8NHG7	77 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	GAB3	Q8WWW8	586 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	USP6NL	Q92738	828 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	DDX11	Q96FC9	970 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RPGRIP1	Q96KN7	1286 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RPS6KC1	Q96S38	1066 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ACO2	Q99798	780 aa	Known RBP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SOX7	Q9BT81	388 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RNF38	Q9H0F5	515 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ZNF700	Q9H0M5	742 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	DLL4	Q9NR61	685 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RXFP3	Q9NSD7	469 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FLRT1	Q9NZU1	646 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ARHGAP20	Q9P2F6	1191 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SCOC	Q9UIL1	159 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	IPP	Q9Y573	584 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PCDHB6	Q9Y5E3	794 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	USP16	Q9Y5T5	823 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	LRBA	P50851	2863 aa		5.48	□□□□□ -1.53
ECHDC1-223	ENST00000534442	LOC285556	D6RIA3	1793 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442		A0A0G2JLL6	359 aa	Predicted RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CCDC154	A6NI56	674 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	KIF28P	B7ZC32	967 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TCP10L2	B9ZVM9	353 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FYB1	O15117	783 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	HTRA2	O43464	458 aa	Predicted RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SP9	P0CG40	484 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	WAS	P42768	502 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	GPR15	P49685	360 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	USP14	P54578	494 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	NCKAP1L	P55160	1127 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ANTXR2	P58335	489 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SRSF3	P84103	164 aa	Known RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CD83	Q01151	205 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	NFATC3	Q12968	1075 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MALL	Q13021	153 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ADAM9	Q13443	819 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	BIRC2	Q13490	618 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	HDAC1	Q13547	482 aa	Predicted RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	KCNMB1	Q16558	191 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	IL31	Q6EBC2	164 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	OVCH2	Q7RTZ1	564 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PRRT2	Q7Z6L0	340 aa	Predicted RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	STK32C	Q86UX6	486 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	HERC6	Q8IVU3	1022 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	GRAMD1C	Q8IYS0	662 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CDYL2	Q8N8U2	506 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ZBTB34	Q8NCN2	500 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PJA1	Q8NG27	643 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PPP1R35	Q8TAP8	253 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SMARCC2	Q8TAQ2	1214 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	NRG4	Q8WWG1	115 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FATE1	Q969F0	183 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MRPL38	Q96DV4	380 aa	Known RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MVB12A	Q96EY5	273 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FMNL2	Q96PY5	1086 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TMEM209	Q96SK2	561 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MAP3K14	Q99558	947 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	GORASP1	Q9BQQ3	440 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FDXACB1	Q9BRP7	624 aa	Predicted RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	NOL10	Q9BSC4	688 aa	Known RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TACO1	Q9BSH4	297 aa	Known RBP	5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	HAPLN2	Q9GZV7	340 aa		5.47	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CNTD2	Q9H8S5	307 aa		5.47	□□□□□ -1.53

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