RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 SERPINC1P01008 464 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 GNAI2P04899 355 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ATP1A1P05023 1023 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CHGBP05060 677 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 LPLP06858 475 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 HMOX1P09601 288 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MED14OSP0DP75 135 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 GHRP10912 638 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 YBX3P16989 372 aaKnown RBP eCLIP3.46□□□□□ -1.862e-8■□□□□ 9.4
CSDE1-216ENST00000534389 GNAZP19086 355 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 RPL13P26373 211 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CDC25AP30304 524 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 IARSP41252 1262 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ME1P48163 572 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 KCNC1P48547 511 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 FXR1P51114 621 aaKnown RBP eCLIP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CCNG1P51959 295 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 LGALS4P56470 323 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 GJA9P57773 515 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CDK17Q00537 523 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 GUCY1B3Q02153 619 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 PLOD1Q02809 727 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 C2orf54Q08AI8 447 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MPP3Q13368 585 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CUL3Q13618 768 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MOGSQ13724 837 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 Q4G0T1 1027 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 RRP12Q5JTH9 1297 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MFSD4BQ5TF39 518 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 PAPD7Q5XG87 772 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 SPECC1LQ69YQ0 1117 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 KRT40Q6A162 431 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ADALQ6DHV7 355 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 OTUD7BQ6GQQ9 843 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 OR52E8Q6IFG1 317 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 PPP4R3AQ6IN85 833 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 GALNT17Q6IS24 598 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 HIBCHQ6NVY1 386 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CRELD2Q6UXH1 353 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MAEAQ7L5Y9 396 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 SDCCAG8Q86SQ7 713 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 RTN4RL1Q86UN2 441 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ERICH1Q86X53 443 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CD302Q8IX05 232 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ELOA2Q8IYF1 753 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 TMEFF1Q8IYR6 380 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ADGRG2Q8IZP9 1017 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 SYCP3Q8IZU3 236 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CARFQ8N187 725 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MMGT1Q8N4V1 131 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CDYL2Q8N8U2 506 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MLKLQ8NB16 471 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 LINC00301Q8NCQ3 95 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 NSUN7Q8NE18 718 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC148Q8NFR7 591 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 NUP133Q8WUM0 1156 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 GAB3Q8WWW8 586 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 JDP2Q8WYK2 163 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 PRCCQ92733 491 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MAP4K1Q92918 833 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 GCDHQ92947 438 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 EAF2Q96CJ1 260 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF496Q96IT1 587 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 RSRC1Q96IZ7 334 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 LCORQ96JN0 433 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 AGAP3Q96P47 875 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ZIM3Q96PE6 472 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 UIMC1Q96RL1 719 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 TSC22D3Q99576 134 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 SIL1Q9H173 461 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 RMI1Q9H9A7 625 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 METTL14Q9HCE5 456 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 PREBQ9HCU5 417 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 TYW1Q9NV66 732 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 KCMF1Q9P0J7 381 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 HSFX1Q9UBD0 423 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 NKX1-2Q9UD57 310 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 Q9UFV3 132 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 SAP30BPQ9UHR5 308 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 HOOK1Q9UJC3 728 aaKnown RBP3.46□□□□□ -1.86
CSDE1-216ENST00000534389 MAN1B1Q9UKM7 699 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CFAP45Q9UL16 551 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 PCDHB6Q9Y5E3 794 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 CDC42BPBQ9Y5S2 1711 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 SBNO1A3KN83 1393 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 COL15A1P39059 1388 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ATP10BO94823 1461 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 ABCA8O94911 1581 aa3.46□□□□□ -1.86
CSDE1-216ENST00000534389 UBN2Q6ZU65 1347 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MYPNQ86TC9 1320 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SALL1Q9NSC2 1324 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ANKARQ7Z5J8 1434 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SYCP2Q9BX26 1530 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MAP3K4Q9Y6R4 1608 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 FAM237AA0A1B0GTK4 181 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 A0A1B0GTL3 188 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 GOLGA6L7A0A1B0GV03 622 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 GMNCA6NCL1 334 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 AKR1B15C9JRZ8 316 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms