RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 GTF2A2P52657 109 aa13□□□□□ -0.33
RAD50-209ENST00000533482 SLC12A1Q13621 1099 aa13□□□□□ -0.33
RAD50-209ENST00000533482 PLCB4Q15147 1175 aa13□□□□□ -0.33
RAD50-209ENST00000533482 TREML2Q5T2D2 321 aa13□□□□□ -0.33
RAD50-209ENST00000533482 CATSPERGQ6ZRH7 1159 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ACTL9Q8TC94 416 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ROPN1BQ9BZX4 212 aaPredicted RBP13□□□□□ -0.33
RAD50-209ENST00000533482 ROPN1Q9HAT0 212 aaPredicted RBP13□□□□□ -0.33
RAD50-209ENST00000533482 SLC40A1Q9NP59 571 aa13□□□□□ -0.33
RAD50-209ENST00000533482 TSR3Q9UJK0 312 aaKnown RBP13□□□□□ -0.33
RAD50-209ENST00000533482 GOLGA8CPA6NN73 597 aa13□□□□□ -0.33
RAD50-209ENST00000533482 POU5F1BQ06416 359 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ATP13A4Q4VNC1 1196 aa13□□□□□ -0.33
RAD50-209ENST00000533482 BTBD8Q5XKL5 378 aa13□□□□□ -0.33
RAD50-209ENST00000533482 NOTUMQ6P988 496 aa13□□□□□ -0.33
RAD50-209ENST00000533482 PALB2Q86YC2 1186 aa13□□□□□ -0.33
RAD50-209ENST00000533482 RNF135Q8IUD6 432 aa13□□□□□ -0.33
RAD50-209ENST00000533482 DNERQ8NFT8 737 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ALG3Q92685 438 aa13□□□□□ -0.33
RAD50-209ENST00000533482 FSD1LQ9BXM9 530 aa13□□□□□ -0.33
RAD50-209ENST00000533482 BFARQ9NZS9 450 aa13□□□□□ -0.33
RAD50-209ENST00000533482 COL20A1Q9P218 1284 aa13□□□□□ -0.33
RAD50-209ENST00000533482 PSMC3IPQ9P2W1 217 aaPredicted RBP13□□□□□ -0.33
RAD50-209ENST00000533482 VAV3Q9UKW4 847 aa13□□□□□ -0.33
RAD50-209ENST00000533482 HES2Q9Y543 173 aa13□□□□□ -0.33
RAD50-209ENST00000533482 PIAS1O75925 651 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ACO1P21399 889 aaKnown RBP13□□□□□ -0.33
RAD50-209ENST00000533482 THPOP40225 353 aa13□□□□□ -0.33
RAD50-209ENST00000533482 MYBPC2Q14324 1141 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ANO5Q75V66 913 aa13□□□□□ -0.33
RAD50-209ENST00000533482 BBS5Q8N3I7 341 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ASAP3Q8TDY4 903 aa13□□□□□ -0.33
RAD50-209ENST00000533482 PPWD1Q96BP3 646 aaKnown RBP13□□□□□ -0.33
RAD50-209ENST00000533482 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
RAD50-209ENST00000533482 NUDCD1Q96RS6 583 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ZBED2Q9BTP6 218 aa13□□□□□ -0.33
RAD50-209ENST00000533482 RRAGCQ9HB90 399 aa13□□□□□ -0.33
RAD50-209ENST00000533482 PCMTD2Q9NV79 361 aa13□□□□□ -0.33
RAD50-209ENST00000533482 ZFATQ9P243 1243 aa13□□□□□ -0.33
RAD50-209ENST00000533482 APOBEC2Q9Y235 224 aaKnown RBP13□□□□□ -0.33
RAD50-209ENST00000533482 ZBBXA8MT70 800 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 PIK3CDO00329 1044 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 PPFIA2O75334 1257 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 PTK7Q13308 1070 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 ARHGEF6Q15052 776 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 BTNL9Q6UXG8 535 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 ABRAQ8N0Z2 381 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 DNAJB3Q8WWF6 145 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 NUF2Q9BZD4 464 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 TTYH3Q9C0H2 523 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 ZFYVE28Q9HCC9 887 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 CD248Q9HCU0 757 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 SAE1Q9UBE0 346 aaPredicted RBP12.99□□□□□ -0.33
RAD50-209ENST00000533482 SHBGP04278 402 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 ZSCAN5DPP0CG00 497 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 CPA2P48052 419 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 JAG1P78504 1218 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 ZNF200P98182 395 aaPredicted RBP12.99□□□□□ -0.33
RAD50-209ENST00000533482 CENPCQ03188 943 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 GRAMD1BQ3KR37 738 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 MROH9Q5TGP6 573 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 CEP120Q8N960 986 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 ZBTB10Q96DT7 871 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 PWWP2AQ96N64 755 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 SNTG2Q9NY99 539 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 IL18RAPO95256 599 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 PMLP29590 882 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 RAD23BP54727 409 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 MFSD7Q6UXD7 560 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 CDKL3Q8IVW4 592 aaPredicted RBP12.99□□□□□ -0.33
RAD50-209ENST00000533482 REPS2Q8NFH8 660 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 OR6P1Q8NGX9 317 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 SGSM3Q96HU1 749 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.99□□□□□ -0.33
RAD50-209ENST00000533482 UBIAD1Q9Y5Z9 338 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 SPECC1L-ADORA2AF8WAN1 911 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 ADCY3O60266 1144 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 CASP2P42575 452 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 OR1G1P47890 313 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 RRP1BQ14684 758 aaKnown RBP12.99□□□□□ -0.33
RAD50-209ENST00000533482 C11orf63Q6NUN7 778 aa12.99□□□□□ -0.33
RAD50-209ENST00000533482 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.99□□□□□ -0.33
RAD50-209ENST00000533482 ATP8B3O60423 1300 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 ARHGEF37A1IGU5 675 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 CCNE2O96020 404 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 ACAT1P24752 427 aaKnown RBP12.98□□□□□ -0.33
RAD50-209ENST00000533482 FLT3P36888 993 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 BEX3Q00994 111 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 DBN1Q16643 649 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 SPATA24Q86W54 205 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 TSSK1BQ9BXA7 367 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 SENP1Q9P0U3 644 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 TYW5A2RUC4 315 aaKnown RBP12.98□□□□□ -0.33
RAD50-209ENST00000533482 F8VP50 259 aa12.98□□□□□ -0.33
RAD50-209ENST00000533482 IGF2BP3O00425 579 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAD50-209ENST00000533482 TTC4O95801 387 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms