RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 AIPL1Q9NZN9 384 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 CDYLQ9Y232 598 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF335Q9H4Z2 1342 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 A0A1W2PRG6 482 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 GNB5O14775 395 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PRPSAP2O60256 369 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ARL4DP49703 201 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ITGA7Q13683 1181 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ABCB5Q2M3G0 1257 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 KHDRBS2Q5VWX1 349 aaKnown RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ARL6IP4Q66PJ3 421 aaKnown RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 FGD2Q7Z6J4 655 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PCDHB8Q9UN66 801 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 CDY2AQ9Y6F7 541 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 CDY1Q9Y6F8 540 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 MYH15Q9Y2K3 1946 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PDE8BO95263 885 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 CDC25AP30304 524 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 MAGEA8P43361 318 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 NR1H2P55055 460 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TCP10Q12799 353 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ANKMY2Q8IV38 441 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PDCD6IPQ8WUM4 868 aaKnown RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZSCAN10Q96SZ4 725 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 EPAS1Q99814 870 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 LGR6Q9HBX8 967 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 KRT84Q9NSB2 600 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TAGLN3Q9UI15 199 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 RAB23Q9ULC3 237 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 SLC26A4O43511 780 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TAF5LO75529 589 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 CYP2E1P05181 493 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PAMP19021 973 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ARSEP51690 589 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 CDC42EP1Q00587 391 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ORC2Q13416 577 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 RASA2Q15283 850 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 RNF220Q5VTB9 566 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PPP4R3CPQ6ZMV5 832 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TRAPPC11Q7Z392 1133 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ARHGEF19Q8IW93 802 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 SLC25A41Q8N5S1 370 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 CASKIN2Q8WXE0 1202 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 FAM89AQ96GI7 184 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PLA2G12BQ9BX93 195 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF532Q9HCE3 1301 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 SYNJ2BP-COX16A0A087WUM0 186 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 DENND3A2RUS2 1198 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 CLIC2O15247 247 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 RPS6KA4O75676 772 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ARL4AP40617 200 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 FAM102BQ5T8I3 360 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 C11orf88Q6PI97 169 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZBTB8BQ8NAP8 495 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ERP44Q9BS26 406 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 NUP85Q9BW27 656 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 MRPL39Q9NYK5 338 aaKnown RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 COX16Q9P0S2 106 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PCDHB6Q9Y5E3 794 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 V9GYQ6 96 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 MYH9P35579 1960 aaKnown RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 RPLP2P05387 115 aaKnown RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF200P98182 395 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TRAF3Q13114 568 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 NR5A1Q13285 461 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TRADDQ15628 312 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 AKIRIN2Q53H80 203 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TAF2Q6P1X5 1199 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 GALNT15Q8N3T1 639 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ATL2Q8NHH9 583 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 SNX19Q92543 992 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 C9orf72Q96LT7 481 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZSCAN32Q9NX65 697 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 NALCNQ8IZF0 1738 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ABCB1P08183 1280 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF806P0C7X5 589 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PRCPP42785 496 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PRR23CQ6ZRP0 262 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 SCAIQ8N9R8 606 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 POC5Q8NA72 575 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TTC8Q8TAM2 541 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 GPKOWQ92917 476 aaPredicted RBP eCLIP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 E2F7Q96AV8 911 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 MYH3P11055 1940 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 TRIM49D1C9J1S8 452 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 AREL1O15033 823 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 QARSP47897 775 aaKnown RBP8.15□□□□□ -1.1
CSRP1-218ENST00000533402 GTF2IP78347 998 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 XRCC4Q13426 336 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 FASTKD1Q53R41 847 aaKnown RBP8.15□□□□□ -1.1
CSRP1-218ENST00000533402 USP38Q8NB14 1042 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 MAGEC3Q8TD91 643 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 HDHD2Q9H0R4 259 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 ZFYVE28Q9HCC9 887 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 CYP26B1Q9NR63 512 aa8.15□□□□□ -1.1
CSRP1-218ENST00000533402 CNOT8Q9UFF9 292 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms