RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 NBR1Q14596 966 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 CDSNQ15517 529 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 CSPP1Q1MSJ5 1256 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ARHGEF16Q5VV41 709 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 IER5Q5VY09 327 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 JAKMIP3Q5VZ66 844 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 EGFLAMQ63HQ2 1017 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 MFSD6Q6ZSS7 791 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 TMC7Q7Z402 723 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SCD5Q86SK9 330 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PELI3Q8N2H9 469 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SYT2Q8N9I0 419 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 TMEM145Q8NBT3 493 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ZSCAN18Q8TBC5 510 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 DDX12PQ92771 950 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 SMARCD2Q92925 531 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 CPB2Q96IY4 423 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ACAP3Q96P50 834 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 RNF26Q9BY78 433 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 COL4A3BPQ9Y5P4 624 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 APOBP04114 4563 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 MUC2Q02817 5179 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 MED12LQ86YW9 2145 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 HEPACAM2A8MVW5 462 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 RPS6KA5O75582 802 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 ZEB1P37275 1124 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 AP3B2Q13367 1082 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 LPAL2Q16609 132 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PROX2Q3B8N5 592 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 XKR3Q5GH77 459 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 MCF2L2Q86YR7 1114 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 LSM14AQ8ND56 463 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 NSUN7Q8NE18 718 aaKnown RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 LMO3Q8TAP4 145 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 LEO1Q8WVC0 666 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 KLF6Q99612 283 aaPredicted RBP1.93□□□□□ -2.1
KNL1-211ENST00000533001 DMAC2Q9NW81 257 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 RABGEF1Q9UJ41 708 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 GIT1Q9Y2X7 761 aa1.93□□□□□ -2.1
KNL1-211ENST00000533001 H3BMH7 237 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 CST3P01034 146 aaPredicted RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 ZNF883P0CG24 379 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 SLC6A11P48066 632 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 LMNB2Q03252 620 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 GRM2Q14416 872 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 E2F4Q16254 413 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 SOWAHAQ2M3V2 549 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 HSP90AB4PQ58FF6 505 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 ATAT1Q5SQI0 421 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 TOGARAM2Q6ZUX3 1019 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 GPRIN1Q7Z2K8 1008 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 ADIPOR2Q86V24 386 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 SPATS2Q86XZ4 545 aaKnown RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 KRTAP1-3Q8IUG1 177 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 FMNL3Q8IVF7 1028 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 SUGP1Q8IWZ8 645 aaKnown RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 CHCHD4Q8N4Q1 142 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 TDRD5Q8NAT2 981 aaKnown RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 FLCNQ8NFG4 579 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 TBCKQ8TEA7 893 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 PPP1R16BQ96T49 567 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 SLC6A17Q9H1V8 727 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 MARK1Q9P0L2 795 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 L1RE1Q9UN81 338 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 PIAS3Q9Y6X2 628 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 V9GY48 417 aaPredicted RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 EXPH5Q8NEV8 1989 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 PRR5-ARHGAP8B1AHC4 643 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 IPO8O15397 1037 aaKnown RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 ZC3H11AO75152 810 aaKnown RBP eCLIP1.92□□□□□ -2.1
KNL1-211ENST00000533001 IFIT2P09913 472 aaKnown RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 RPA1P27694 616 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 GLUD2P49448 558 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 ARHGAP8P85298 464 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 PAK2Q13177 524 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 TMEM119Q4V9L6 283 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 BMP2KLQ5H9B9 411 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 RRP12Q5JTH9 1297 aaKnown RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 TRNP1Q6NT89 227 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 OTOP3Q7RTS5 596 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 CHERPQ8IWX8 916 aaKnown RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 RDM1Q8NG50 284 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 FRS2Q8WU20 508 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 RLN3Q8WXF3 142 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 ING5Q8WYH8 240 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 SMG7Q92540 1137 aaKnown RBP1.92□□□□□ -2.1
KNL1-211ENST00000533001 GLG1Q92896 1179 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 MRGPRX1Q96LB2 322 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 IER2Q9BTL4 223 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 FUCA2Q9BTY2 467 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 ARRDC1-AS1Q9H2J1 176 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 VRTNQ9H8Y1 702 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 NMUR1Q9HB89 426 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 OSGEPQ9NPF4 335 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 DLL4Q9NR61 685 aa1.92□□□□□ -2.1
KNL1-211ENST00000533001 TNFSF13BQ9Y275 285 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms