RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 LY6KQ17RY6 165 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 C6orf183Q5T699 404 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 WDR59Q6PJI9 974 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 POTEGQ6S5H5 508 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CTAGE3PQ8IX95 158 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 SH3TC2Q8TF17 1288 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 BORCS6Q96GS4 357 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CORO1BQ9BR76 489 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 SEMA4AQ9H3S1 761 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 R3HDMLQ9H3Y0 253 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 STX18Q9P2W9 335 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 RABGEF1Q9UJ41 708 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 AGTPBP1Q9UPW5 1226 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 ASB3Q9Y575 518 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 FADS3Q9Y5Q0 445 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MANSC4A6NHS7 340 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 TRIM64CA6NLI5 447 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 RNF225M0QZC1 329 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MGEA5O60502 916 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 TNFAIP8O95379 198 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MT-ND3P03897 115 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 ARP10275 920 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 ALADP13716 330 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CCND2P30279 289 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 HOXD12P35452 270 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 BEX3Q00994 111 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 LRRC63Q05C16 580 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 LSAMPQ13449 338 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 LLGL1Q15334 1064 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 NTRK3Q16288 839 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 PKN1Q16512 942 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 TMEM63BQ5T3F8 832 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 LMBRD2Q68DH5 695 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CATSPERGQ6ZRH7 1159 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 PALM2Q8IXS6 379 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MTMR14Q8NCE2 650 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 IL31RAQ8NI17 732 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 TTC17Q96AE7 1141 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 COX4I2Q96KJ9 171 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MTA3Q9BTC8 594 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 BHMT2Q9H2M3 363 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 GOLPH3Q9H4A6 298 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 SEPT3Q9UH03 358 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 ZMYND8Q9ULU4 1186 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 AFG3L2Q9Y4W6 797 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 AK5Q9Y6K8 562 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 N4BP2Q86UW6 1770 aaPredicted RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 WDR19Q8NEZ3 1342 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 POTEB3A0JP26 581 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 LRRIQ4A6NIV6 560 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 XPOTO43592 962 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 CNOT3O75175 753 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 OXCT1P55809 520 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TUBA4AP68366 448 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 KRT76Q01546 638 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TRIP13Q15645 432 aaPredicted RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 FAM117BQ6P1L5 589 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 POTEBQ6S5H4 581 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 DPH6Q7L8W6 267 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 PLEKHH3Q7Z736 793 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 MYCT1Q8N699 235 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 SMYD1Q8NB12 490 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 PPP4R1Q8TF05 950 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 PPWD1Q96BP3 646 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 CEP170P1Q96L14 293 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 CNBD2Q96M20 576 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 NLRP4Q96MN2 994 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TEKT3Q9BXF9 490 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 MRPL46Q9H2W6 279 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 CCDC134Q9H6E4 229 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 CYP4F11Q9HBI6 524 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TBCCD1Q9NVR7 557 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TUBGCP4Q9UGJ1 667 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 E9PMD0 336 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 SLC37A4O43826 429 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 TBC1D12O60347 775 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 PPP1R11O60927 126 aaPredicted RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 AFPP02771 609 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 ICAM1P05362 532 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 FECHP22830 423 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 MAP4P27816 1152 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 GJA5P36382 358 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 APLP1P51693 650 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 CCNG1P51959 295 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 RAB15P59190 212 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 SP3Q02447 781 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 ARL6IP4Q66PJ3 421 aaKnown RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 ANKRD40Q6AI12 368 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 C4orf50Q6ZRC1 276 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 GET4Q7L5D6 327 aaPredicted RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 CDR2LQ86X02 465 aaPredicted RBP7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 HPS3Q969F9 1004 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 EFHD1Q9BUP0 239 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 OSBPL10Q9BXB5 764 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 RNF208Q9H0X6 261 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 PDGFCQ9NRA1 345 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 GABBR1Q9UBS5 961 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 DNM3Q9UQ16 869 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 AKT3Q9Y243 479 aa7.1□□□□□ -1.27
TGFBR3-209ENST00000532540 UMODL1Q5DID0 1318 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms