RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PASD1Q8IV76 773 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 GLYCTKQ8IVS8 523 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 RNF168Q8IYW5 571 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 AUTS2Q8WXX7 1259 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 TGS1Q96RS0 853 aaKnown RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 ACBD6Q9BR61 282 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 HERC2P3Q9BVR0 1158 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 CRTAC1Q9NQ79 661 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 GTF3C4Q9UKN8 822 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 RANBP2P49792 3224 aaKnown RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 RPL17P18621 184 aaKnown RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 ADORA2BP29275 332 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 GLUD2P49448 558 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 TSPY1Q01534 308 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 CDR2Q01850 454 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 PLCB3Q01970 1234 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 MRPL58Q14197 206 aaKnown RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 PSMD5Q16401 504 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 INTS6LQ5JSJ4 861 aaKnown RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 PPP1R26Q5T8A7 1209 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 RAD9BQ6WBX8 426 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 ANKS3Q6ZW76 656 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 VPS36Q86VN1 386 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 DDX1Q92499 740 aaKnown RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 TRIM44Q96DX7 344 aaPredicted RBP20.24■□□□□ 0.83
SMPD1-205ENST00000531303 CYFIP2Q96F07 1278 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 CHST7Q9NS84 486 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 SPTLC3Q9NUV7 552 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 ADAMTS1Q9UHI8 967 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 KIAA1257Q9ULG3 409 aa20.24■□□□□ 0.83
SMPD1-205ENST00000531303 H7C4K7 107 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 MED7O43513 233 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 URODP06132 367 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 FMO1Q01740 532 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 CYP27A1Q02318 531 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 MAPK8IP2Q13387 824 aaPredicted RBP20.23■□□□□ 0.83
SMPD1-205ENST00000531303 PPP2R2DQ66LE6 453 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 RSPO2Q6UXX9 243 aaPredicted RBP20.23■□□□□ 0.83
SMPD1-205ENST00000531303 LRRTM3Q86VH5 581 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 LNX1Q8TBB1 728 aaPredicted RBP20.23■□□□□ 0.83
SMPD1-205ENST00000531303 MED10Q9BTT4 135 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 PLVAPQ9BX97 442 aa20.23■□□□□ 0.83
SMPD1-205ENST00000531303 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMPD1-205ENST00000531303 MYO9BQ13459 2157 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 A0A087X0T9 212 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 SSU72P8A0A1W2PR75 194 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 TMCO5BA8MYB1 307 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 CLDN5O00501 218 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 DDX3XO00571 662 aaKnown RBP eCLIP20.22■□□□□ 0.831e-11■■■■■ 71.9
SMPD1-205ENST00000531303 FAM228BP0C875 321 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 KIF11P52732 1056 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 DSG1Q02413 1049 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 GFPT1Q06210 699 aaPredicted RBP20.22■□□□□ 0.83
SMPD1-205ENST00000531303 GOLGA7BQ2TAP0 167 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 DENND1BQ6P3S1 775 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 PALB2Q86YC2 1186 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 UBA3Q8TBC4 463 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 SLC2A14Q8TDB8 520 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 PCDHB18PQ96TA0 734 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 SYT11Q9BT88 431 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 TMLHEQ9NVH6 421 aa20.22■□□□□ 0.83
SMPD1-205ENST00000531303 OR6C75A6NL08 312 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 O00370 1275 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 MICAL2O94851 1124 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 CYLC1P35663 651 aaPredicted RBP20.21■□□□□ 0.83
SMPD1-205ENST00000531303 ERVK-21P61565 698 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 CNGA2Q16280 664 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 SLC39A12Q504Y0 691 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 SMYD5Q6GMV2 418 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 TMC7Q7Z402 723 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 ZNF677Q86XU0 584 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 FBXO22Q8NEZ5 403 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 MYCBPAPQ8TBZ2 947 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 SPPL3Q8TCT6 385 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 POF1BQ8WVV4 589 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 PIK3R5Q8WYR1 880 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 MYLPFQ96A32 169 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 PGLYRP2Q96PD5 576 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 C11orf84Q9BUA3 381 aaPredicted RBP20.21■□□□□ 0.83
SMPD1-205ENST00000531303 B3GNT5Q9BYG0 378 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 ZCWPW1Q9H0M4 648 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 PRO3102Q9H379 93 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 SLC28A3Q9HAS3 691 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 MRPL17Q9NRX2 175 aaKnown RBP20.21■□□□□ 0.83
SMPD1-205ENST00000531303 TSPAN16Q9UKR8 245 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMPD1-205ENST00000531303 CDY1Q9Y6F8 540 aa20.21■□□□□ 0.83
SMPD1-205ENST00000531303 EPN1Q9Y6I3 576 aaPredicted RBP20.21■□□□□ 0.83
SMPD1-205ENST00000531303 MYO7AQ13402 2215 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 M0QYV0 167 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 GRM6O15303 877 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 ARHGAP6O43182 974 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 ADAM12O43184 909 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 CXCL14O95715 111 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 RB1P06400 928 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 CPB1P15086 417 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 DNAJB1P25685 340 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 ASTE1Q2TB18 679 aaPredicted RBP20.2■□□□□ 0.82
SMPD1-205ENST00000531303 FAM171BQ6P995 826 aa20.2■□□□□ 0.82
SMPD1-205ENST00000531303 DNAAF5Q86Y56 855 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms