RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 PLEKHA4Q9H4M7 779 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 UBE2ZQ9H832 354 aaPredicted RBP22.74■■□□□ 1.23
CAPN1-220ENST00000530567 PTPRDP23468 1912 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 A0A1B0GTH6 734 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 TEX33O43247 280 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 PTPN1P18031 435 aaKnown RBP22.74■■□□□ 1.23
CAPN1-220ENST00000530567 FANCCQ00597 558 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 ANKRD54Q6NXT1 300 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 ACOT1Q86TX2 421 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 CRYBG2Q8N1P7 616 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 ERGIC2Q96RQ1 377 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 LSM14BQ9BX40 385 aaKnown RBP22.74■■□□□ 1.23
CAPN1-220ENST00000530567 PRDM6Q9NQX0 595 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 DZANK1Q9NVP4 752 aa22.74■■□□□ 1.23
CAPN1-220ENST00000530567 SPTBN5Q9NRC6 3674 aaKnown RBP22.73■■□□□ 1.23
CAPN1-220ENST00000530567 PAPLNO95428 1278 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 C8AP07357 584 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 UBXN1Q04323 297 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 SMARCB1Q12824 385 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 SYCP1Q15431 976 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 MDH1BQ5I0G3 518 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 TCEAL8Q8IYN2 117 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 TTC39CQ8N584 583 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 SLC7A14Q8TBB6 771 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 MYCBPAPQ8TBZ2 947 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 MYLPFQ96A32 169 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 PCED1BQ96HM7 432 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 UBE2TQ9NPD8 197 aaPredicted RBP22.73■■□□□ 1.23
CAPN1-220ENST00000530567 PLCB1Q9NQ66 1216 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 MAFFQ9ULX9 164 aa22.73■■□□□ 1.23
CAPN1-220ENST00000530567 XIRP2A4UGR9 3374 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 RFPL2O75678 378 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 ZMYND10O75800 440 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 SRGAP2BP0DMP2 458 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 RAD23BP54727 409 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 DUSP4Q13115 394 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 NFE2Q16621 373 aaPredicted RBP22.72■■□□□ 1.23
CAPN1-220ENST00000530567 KLHDC7AQ5VTJ3 777 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 EP400NLQ6ZTU2 488 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 C12orf76Q8N812 135 aaPredicted RBP22.72■■□□□ 1.23
CAPN1-220ENST00000530567 TNIP3Q96KP6 325 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 NT5C1AQ9BXI3 368 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 RBSNQ9H1K0 784 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 GANQ9H2C0 597 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 CYP4F11Q9HBI6 524 aa22.72■■□□□ 1.23
CAPN1-220ENST00000530567 ABI2Q9NYB9 513 aaPredicted RBP22.72■■□□□ 1.23
CAPN1-220ENST00000530567 EPHB6O15197 1021 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 NOL4O94818 638 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 SERPINC1P01008 464 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 KCNA5P22460 613 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 YWHAEP62258 255 aaKnown RBP22.71■■□□□ 1.23
CAPN1-220ENST00000530567 ZNF394Q53GI3 561 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 LIN9Q5TKA1 542 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 IQCEQ6IPM2 695 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 ENOSF1Q7L5Y1 443 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 SLC4A11Q8NBS3 891 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 SPPL2BQ8TCT7 592 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 C2orf15Q8WU43 125 aaKnown RBP22.71■■□□□ 1.23
CAPN1-220ENST00000530567 HLA-CQ95604 372 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 JAKMIP2Q96AA8 810 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 RHOBTB2Q9BYZ6 727 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 S1PR5Q9H228 398 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 SFXN1Q9H9B4 322 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 ABCB6Q9NP58 842 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 HSFX1Q9UBD0 423 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 DPP7Q9UHL4 492 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 CNTN6Q9UQ52 1028 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 SLC27A5Q9Y2P5 690 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 INSL5Q9Y5Q6 135 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 FHOD1Q9Y613 1164 aa22.71■■□□□ 1.23
CAPN1-220ENST00000530567 H3BQ06 376 aaPredicted RBP22.7■■□□□ 1.22
CAPN1-220ENST00000530567 HOXB8P17481 243 aaPredicted RBP22.7■■□□□ 1.22
CAPN1-220ENST00000530567 HOXA9P31269 272 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 ZNF132P52740 706 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 NR1I3Q14994 352 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 MAPRE1Q15691 268 aaKnown RBP22.7■■□□□ 1.22
CAPN1-220ENST00000530567 PTPN21Q16825 1174 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 UVSSAQ2YD98 709 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 CFAP221Q4G0U5 840 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 CCDC149Q6ZUS6 474 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 C12orf29Q8N999 325 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 ZNF707Q96C28 371 aaPredicted RBP22.7■■□□□ 1.22
CAPN1-220ENST00000530567 NAA15Q9BXJ9 866 aaKnown RBP22.7■■□□□ 1.22
CAPN1-220ENST00000530567 B3GNT5Q9BYG0 378 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 ZDHHC7Q9NXF8 308 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 DNAJC12Q9UKB3 198 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 COG5Q9UP83 839 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 YIPF1Q9Y548 306 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 PCDHB5Q9Y5E4 795 aa22.7■■□□□ 1.22
CAPN1-220ENST00000530567 RNF225M0QZC1 329 aaPredicted RBP22.69■■□□□ 1.22
CAPN1-220ENST00000530567 PRRG1O14668 218 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 SOAT2O75908 522 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 UCHL3P15374 230 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 ELF1P32519 619 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 FILIP1LQ4L180 1135 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 TMEM270Q6UE05 265 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 PAQR9Q6ZVX9 377 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 RTL10Q7L3V2 364 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 SMRP1Q8NCR6 262 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 CMASQ8NFW8 434 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms