RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 SLC1A1P43005 524 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 TNNC1P63316 161 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 RBM10P98175 930 aaKnown RBP8.72□□□□□ -1.01
CMTM1-214ENST00000530141 TAP1Q03518 808 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 MYO1EQ12965 1108 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 STILQ15468 1287 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 WDR93Q6P2C0 686 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 TMEM270Q6UE05 265 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 CREG2Q8IUH2 290 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 PCSK9Q8NBP7 692 aaKnown RBP8.72□□□□□ -1.01
CMTM1-214ENST00000530141 BEST2Q8NFU1 509 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 ACTRT1Q8TDG2 376 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
CMTM1-214ENST00000530141 DDX1Q92499 740 aaKnown RBP8.72□□□□□ -1.01
CMTM1-214ENST00000530141 HLA-CQ95604 372 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 CAPZA3Q96KX2 299 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 TSEN34Q9BSV6 310 aaKnown RBP8.72□□□□□ -1.01
CMTM1-214ENST00000530141 TRIM6Q9C030 488 aaPredicted RBP8.72□□□□□ -1.01
CMTM1-214ENST00000530141 FAM49AQ9H0Q0 323 aaPredicted RBP8.72□□□□□ -1.01
CMTM1-214ENST00000530141 THAP2Q9H0W7 228 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 MINDY3Q9H8M7 445 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 ARFGAP3Q9NP61 516 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 RAB21Q9UL25 225 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 MTUS1Q9ULD2 1270 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 NUB1Q9Y5A7 615 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 GRIN2DO15399 1336 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 PTPRJQ12913 1337 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 ATG2AQ2TAZ0 1938 aa8.72□□□□□ -1.01
CMTM1-214ENST00000530141 ZNF318Q5VUA4 2279 aa8.71□□□□□ -1.01
CMTM1-214ENST00000530141 GOLGA6L10A0A0M3HER8 536 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 LACTBL1A8MY62 500 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 CCDC188H7C350 402 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 PGRMC1O00264 195 aaKnown RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 KCNK3O14649 394 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 TLR3O15455 904 aaKnown RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 LPXNO60711 386 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 SRGAP2O75044 1071 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 CYP1A1P04798 512 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 KRT19P08727 400 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 POLR2BP30876 1174 aaKnown RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 HOXC8P31273 242 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 PNPLA4P41247 253 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 ZNF132P52740 706 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 MYL6P60660 151 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 OSTNP61366 133 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 ADAM17P78536 824 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 PURAQ00577 322 aaKnown RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 CENPCQ03188 943 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 GPS2Q13227 327 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 KIZQ2M2Z5 673 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 SEZ6Q53EL9 994 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 GNASQ5JWF2 1037 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 JADE1Q6IE81 842 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 SPOPLQ6IQ16 392 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 FBXO38Q6PIJ6 1188 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 NT5DC3Q86UY8 548 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 SESTD1Q86VW0 696 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 PHF13Q86YI8 300 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 EFCAB13Q8IY85 973 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 UBR7Q8N806 425 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 TMEM35BQ8NCS4 154 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 SPATA4Q8NEY3 305 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 OLIG1Q8TAK6 271 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 ZNF564Q8TBZ8 553 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 MAIP1Q8WWC4 291 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 TSC1Q92574 1164 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 HES6Q96HZ4 224 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 CPB2Q96IY4 423 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 RUNDC3BQ96NL0 473 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 MMS19Q96T76 1030 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 PCDHB18PQ96TA0 734 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 PARD6BQ9BYG5 372 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 CARD9Q9H257 536 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 ACBD3Q9H3P7 528 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 ABCB6Q9NP58 842 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 CISHQ9NSE2 258 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 CNOT8Q9UFF9 292 aaKnown RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 KIAA1257Q9ULG3 409 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 TTC7AQ9ULT0 858 aaPredicted RBP8.71□□□□□ -1.02
CMTM1-214ENST00000530141 PCDHGC3Q9UN70 934 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 PCDHA11Q9Y5I1 949 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 TRPV2Q9Y5S1 764 aa8.71□□□□□ -1.02
CMTM1-214ENST00000530141 CCDC66A2RUB6 948 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 PRR33A8MZF0 331 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 NCK2O43639 380 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 CEP104O60308 925 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 BUB1BO60566 1050 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 NPTXRO95502 500 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 CFHP08603 1231 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 IQCF3P0C7M6 154 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 UNGP13051 313 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 CTNNA2P26232 953 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 CST5P28325 142 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 WNT7BP56706 349 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 SNX16P57768 344 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 NOMO3P69849 1222 aa8.7□□□□□ -1.02
CMTM1-214ENST00000530141 PTPN11Q06124 597 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-214ENST00000530141 NAA30Q147X3 362 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms