RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SLC4A7Q9Y6M7 1214 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 A0A087X0T9 212 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ATMINO43313 823 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 RPS6KA5O75582 802 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 FAM228BP0C875 321 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 HMOX2P30519 316 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 DCAF4L1Q3SXM0 396 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 IRGCQ6NXR0 463 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 CRELD2Q6UXH1 353 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 TMC5Q6UXY8 1006 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ZNF720Q7Z2F6 126 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SH3RF1Q7Z6J0 888 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 C4orf19Q8IY42 314 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 EPAS1Q99814 870 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 NT5C1AQ9BXI3 368 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PXMP2Q9NR77 195 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 RABGEF1Q9UJ41 708 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 LMO7Q8WWI1 1683 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 CCDC195A0A1B0GUA6 201 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 CFLARO15519 480 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PYGLP06737 847 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SUPT20HL2P0C7V6 817 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 POLR2EP19388 210 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 TCF7P36402 384 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 LAMC2Q13753 1193 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SV2CQ496J9 727 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 GPAT2Q6NUI2 795 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 NIPA1Q7RTP0 329 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 YTHDF3Q7Z739 585 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PATL1Q86TB9 770 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ZNF710Q8N1W2 664 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SCFD2Q8WU76 684 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 CASKIN2Q8WXE0 1202 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PNMA5Q96PV4 448 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 XPO6Q96QU8 1125 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 VPS33BQ9H267 617 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 CIDEBQ9UHD4 219 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 XPO7Q9UIA9 1087 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 A0A087X0B3 334 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 H0Y3Z8 333 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 CYTH3O43739 400 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 FSBPO95073 299 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 LCA5LO95447 670 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 GPD1P21695 349 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SERPINB9P50453 376 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 CCDC153Q494R4 210 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 BTBD8Q5XKL5 378 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SLC13A5Q86YT5 568 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SH2D3CQ8N5H7 860 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 FLCNQ8NFG4 579 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ZNF507Q8TCN5 953 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SP110Q9HB58 689 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 STX18Q9P2W9 335 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ATXN10Q9UBB4 475 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 CORO1CQ9ULV4 474 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SLC8A2Q9UPR5 921 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PPP2R3BQ9Y5P8 575 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SNX9Q9Y5X1 595 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PRR23AA6NEV1 266 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 RRN3P2A6NIE6 340 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ANKRD65E5RJM6 399 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 SGPL1O95470 568 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PMS1P54277 932 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 TPI1P60174 286 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 FCHO2Q0JRZ9 810 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 DCTN2Q13561 401 aaKnown RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 LONRF1Q17RB8 773 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 MEI1Q5TIA1 1274 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 TRPM8Q7Z2W7 1104 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 LUZP2Q86TE4 346 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 FAM83AQ86UY5 434 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 DACH2Q96NX9 599 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 DMAP1Q9NPF5 467 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-218ENST00000528232 FBXO28Q9NVF7 368 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 PAK5Q9P286 719 aa7.53□□□□□ -1.2
CTNND1-218ENST00000528232 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.2
CTNND1-218ENST00000528232 TCP11X1B4DZS4 312 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 GZMAP12544 262 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 ITGA8P53708 1063 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 BACE1P56817 501 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 ADCK1Q86TW2 530 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 KIRREL3Q8IZU9 778 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 KRT35Q92764 455 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 SEC16BQ96JE7 1060 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 CGRRF1Q99675 332 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 PI4K2AQ9BTU6 479 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 IDI2Q9BXS1 227 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 CELF4Q9BZC1 486 aaKnown RBP7.52□□□□□ -1.21
CTNND1-218ENST00000528232 SLC38A7Q9NVC3 462 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 LZTS1Q9Y250 596 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 COMMD3-BMI1R4GMX3 469 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 F8VZ95 297 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 O00370 1275 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 FOXN3O00409 490 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-218ENST00000528232 CES2O00748 559 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 PAX7P23759 505 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 HOXD10P28358 340 aa7.52□□□□□ -1.21
CTNND1-218ENST00000528232 CASP4P49662 377 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms