RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 TDRD10Q5VZ19 366 aaKnown RBP6.14□□□□□ -1.43
SF3B2-205ENST00000526653 RPTNQ6XPR3 784 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 STOX1Q6ZVD7 989 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 SLC24A5Q71RS6 500 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 FAM129CQ86XR2 697 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 FTSJ3Q8IY81 847 aaKnown RBP6.14□□□□□ -1.43
SF3B2-205ENST00000526653 VPS52Q8N1B4 723 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 KBTBD3Q8NAB2 608 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 PJA1Q8NG27 643 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 SLC22A17Q8WUG5 538 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 GLG1Q92896 1179 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 BORCS6Q96GS4 357 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 SLC12A9Q9BXP2 914 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 ARHGEF3Q9NR81 526 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 RGS18Q9NS28 235 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 ZSCAN32Q9NX65 697 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 GMEB2Q9UKD1 530 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 FBXO4Q9UKT5 387 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 PCDHGA2Q9Y5H1 932 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 PCDHA5Q9Y5H7 936 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 UNC79Q9P2D8 2635 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 PLIN4Q96Q06 1357 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 CACNA1IQ9P0X4 2223 aa6.14□□□□□ -1.43
SF3B2-205ENST00000526653 CNOT1A5YKK6 2376 aaKnown RBP6.14□□□□□ -1.43
SF3B2-205ENST00000526653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.13□□□□□ -1.43
SF3B2-205ENST00000526653 RAB11FIP3O75154 756 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 RPS6KA5O75582 802 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 ZFYP08048 801 aaPredicted RBP6.13□□□□□ -1.43
SF3B2-205ENST00000526653 GSTM1P09488 218 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 INSRRP14616 1297 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 KLRC2P26717 231 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 PMLP29590 882 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 CCND2P30279 289 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 TCF7P36402 384 aaPredicted RBP6.13□□□□□ -1.43
SF3B2-205ENST00000526653 METAP2P50579 478 aaKnown RBP eCLIP6.13□□□□□ -1.433e-7■□□□□ 8.4
SF3B2-205ENST00000526653 HSD17B4P51659 736 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 PMS1P54277 932 aaKnown RBP6.13□□□□□ -1.43
SF3B2-205ENST00000526653 GPC5P78333 572 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 FAM189BP81408 668 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 UBXN2BQ14CS0 331 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 TSHZ3Q63HK5 1081 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 IL31Q6EBC2 164 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 METTL7BQ6UX53 244 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 PPFIBP1Q86W92 1011 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 RNF169Q8NCN4 708 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 ZBTB44Q8NCP5 570 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 TRAPPC12Q8WVT3 735 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 TTC14Q96N46 770 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 CASD1Q96PB1 797 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 RPP25Q9BUL9 199 aaKnown RBP6.13□□□□□ -1.43
SF3B2-205ENST00000526653 MAF1Q9H063 256 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 EPC1Q9H2F5 836 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 SEMA4GQ9NTN9 838 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 RAB23Q9ULC3 237 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 ST3GAL5Q9UNP4 418 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 NOC2LQ9Y3T9 749 aaKnown RBP6.13□□□□□ -1.43
SF3B2-205ENST00000526653 TRPV2Q9Y5S1 764 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 SQORQ9Y6N5 450 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 ASH1LQ9NR48 2969 aaKnown RBP6.13□□□□□ -1.43
SF3B2-205ENST00000526653 NLRC5Q86WI3 1866 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 TTC3P53804 2025 aa6.13□□□□□ -1.43
SF3B2-205ENST00000526653 CCDC195A0A1B0GUA6 201 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 GSTTP1A0A1W2PQM5 241 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 MBLAC1A4D2B0 266 aaPredicted RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 OTOL1A6NHN0 477 aaPredicted RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 SRRM3A6NNA2 597 aaPredicted RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 H0Y8X5 98 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 ORC4O43929 436 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 SSBP05455 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 MSL3P1P0C860 447 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 SNHG28P0DPA3 235 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 IMPDH2P12268 514 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 PPM1AP35813 382 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 ALDH7A1P49419 539 aaKnown RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 NCKAP1LP55160 1127 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 STARD6P59095 220 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 MRPS9P82933 396 aaKnown RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 SHC2P98077 582 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 MVKQ03426 396 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 GNPTABQ3T906 1256 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 PLEKHN1Q494U1 663 aaPredicted RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 SLC44A4Q53GD3 710 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 GPATCH4Q5T3I0 446 aaKnown RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 CCDC171Q6TFL3 1326 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 UNQ6494/PRO21346Q6UXR6 183 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 SLC39A11Q8N1S5 342 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 TAB3Q8N5C8 712 aaPredicted RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 NAT16Q8N8M0 369 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 DMXL2Q8TDJ6 3036 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 SEPT1Q8WYJ6 367 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 DDX1Q92499 740 aaKnown RBP6.12□□□□□ -1.43
SF3B2-205ENST00000526653 SHDQ96IW2 340 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 FERD3LQ96RJ6 166 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 MYADMQ96S97 322 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 KRTAP4-5Q9BYR2 181 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 TMEM117Q9H0C3 514 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 JMJD4Q9H9V9 463 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 C1orf112Q9NSG2 853 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 ECHDC1Q9NTX5 307 aa6.12□□□□□ -1.43
SF3B2-205ENST00000526653 TCP11L1Q9NUJ3 509 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms