RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 AKT3Q9Y243 479 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 RGPD2P0DJD1 1756 aa7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 COL1A1P02452 1464 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-207ENST00000525962 A0A0A6YYK5 440 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 E9PBE3 544 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 KLHL41O60662 606 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ZWINTO95229 277 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 GGPS1O95749 300 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 TAC1P20366 129 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 TYK2P29597 1187 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 VHLP40337 213 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 PHKA2P46019 1235 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 GEMIN4P57678 1058 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 SLC25A3Q00325 362 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 POU5F1BQ06416 359 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 TMEM62Q0P6H9 643 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 FSTL1Q12841 308 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ACAP1Q15027 740 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ATG16L1Q676U5 607 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 OTOAQ7RTW8 1153 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 PTAR1Q7Z6K3 402 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 MCF2L2Q86YR7 1114 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 TEX9Q8N6V9 391 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ICA1LQ8NDH6 482 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 FAM136AQ96C01 138 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ERLEC1Q96DZ1 483 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 CNBD2Q96M20 576 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 RANBP17Q9H2T7 1088 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 DENND2DQ9H6A0 471 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 TMEM8AQ9HCN3 771 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 MAN1C1Q9NR34 630 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ARL8BQ9NVJ2 186 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 NFAT5O94916 1531 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 TTC36A6NLP5 189 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 PDGFRBP09619 1106 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 CETPP11597 493 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 PDGFRAP16234 1089 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 CHRNB2P17787 502 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 MAPK10P53779 464 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ROR1Q01973 937 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 CAV1Q03135 178 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 AP1B1Q10567 949 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 HIC1Q14526 733 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 UGCGQ16739 394 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 APOBEC3HQ6NTF7 200 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 C6orf89Q6UWU4 347 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 UTS2BQ765I0 119 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ZBTB8OSQ8IWT0 167 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 SEPT12Q8IYM1 358 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ETNPPLQ8TBG4 499 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 USP13Q92995 863 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 FAM49AQ9H0Q0 323 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 IL1RL2Q9HB29 575 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 PIDD1Q9HB75 910 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 XAB2Q9HCS7 855 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ZDHHC18Q9NUE0 388 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 AFG3L2Q9Y4W6 797 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 PCDHA10Q9Y5I2 948 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 WASF2Q9Y6W5 498 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 SPATA31A1Q5TZJ5 1347 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 COL5A2P05997 1499 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 CYB561D2O14569 222 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 EIF3DO15371 548 aaKnown RBP eCLIP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 MGRN1O60291 552 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ADORA2BP29275 332 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 GNL1P36915 607 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 SERPINB5P36952 375 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 GLRBP48167 497 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 PEX5P50542 639 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 HMGCS2P54868 508 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 MYL6P60660 151 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 NR1H3Q13133 447 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 MMRN1Q13201 1228 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 GRM1Q13255 1194 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 STX3Q13277 289 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 MED21Q13503 144 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 MTFR1Q15390 333 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 KBTBD12Q3ZCT8 623 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ZNF568Q3ZCX4 644 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ZNF667Q5HYK9 610 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 OR6B3Q8NGW1 331 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 HDAC11Q96DB2 347 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 ZNF317Q96PQ6 595 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 P2RX7Q99572 595 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 Q9H521 79 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 CLIC5Q9NZA1 410 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 NYAP2Q9P242 653 aa7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 BAZ2AQ9UIF9 1905 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-207ENST00000525962 KBTBD13C9JR72 458 aa7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 LMNAP02545 664 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 CIITAP33076 1130 aa7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 WDR4P57081 412 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 PRKCEQ02156 737 aa7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 NME3Q13232 169 aa7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 KLHL38Q2WGJ6 581 aa7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 VSTM1Q6UX27 236 aa7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 BTNL9Q6UXG8 535 aa7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 ART4Q93070 314 aa7.26□□□□□ -1.25
TGFBR3-207ENST00000525962 E2F7Q96AV8 911 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms