RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
TRAPPC4-206ENST00000525303 WDFY3Q8IZQ1 3526 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 GON4LQ3T8J9 2241 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 ANO9A1A5B4 782 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 OTOL1A6NHN0 477 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 CYB561D2O14569 222 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 TRAK2O60296 914 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 PPP6R2O75170 966 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 RPP40O75818 363 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 CCDC192P0DO97 292 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 PAX3P23760 479 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 NMT1P30419 496 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 LONP1P36776 959 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 ACOT2P49753 483 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 ZNF131P52739 623 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 PTPAQ15257 358 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 TMEM196Q5HYL7 178 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 TRIM68Q6AZZ1 485 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 FSTL4Q6MZW2 842 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 KBTBD6Q86V97 674 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 LRRTM3Q86VH5 581 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 METTL23Q86XA0 190 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 THEM5Q8N1Q8 247 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 C12orf50Q8NA57 414 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 SPPL2BQ8TCT7 592 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 GAB3Q8WWW8 586 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 DDX1Q92499 740 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 CHFRQ96EP1 664 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 USP28Q96RU2 1077 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 FAM83CQ9BQN1 747 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 PYM1Q9BRP8 204 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 ZHX3Q9H4I2 956 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 EBF3Q9H4W6 596 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 PARVGQ9HBI0 331 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 HPS4Q9NQG7 708 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 RXFP3Q9NSD7 469 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 ABI2Q9NYB9 513 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 CCL26Q9Y258 94 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 DERAQ9Y315 318 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 ASCC3Q8N3C0 2202 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 PLXND1Q9Y4D7 1925 aa10.33□□□□□ -0.76
TRAPPC4-206ENST00000525303 CCDC163A0A0D9SF12 145 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 TISP43B9A030 160 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 ANKRD63C9JTQ0 380 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 SPTLC2O15270 562 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 EPN2O95208 641 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 KRT18P05783 430 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 ZNF806P0C7X5 589 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 HAPLN1P10915 354 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 SCP2P22307 547 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 AVPR1AP37288 418 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 TXLNAP40222 546 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 UBA7P41226 1012 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 RAP1GAPP47736 663 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 TAF6P49848 677 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 LIMK1P53667 647 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 GTF2BQ00403 316 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 CEBPZQ03701 1054 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 DNM1Q05193 864 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 GRSF1Q12849 480 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 BFSP1Q12934 665 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 RUNX3Q13761 415 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 ZC2HC1CQ53FD0 456 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 WSCD1Q658N2 575 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 ADALQ6DHV7 355 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 FAM173BQ6P4H8 233 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 CACNA2D4Q7Z3S7 1137 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 TMEM150AQ86TG1 271 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 MAB21L3Q8N8X9 362 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 KRI1Q8N9T8 703 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 LINC00301Q8NCQ3 95 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 STKLD1Q8NE28 680 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 RIN3Q8TB24 985 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 C2orf15Q8WU43 125 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 USP13Q92995 863 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 CALML4Q96GE6 196 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 LOXL4Q96JB6 756 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 SPATA32Q96LK8 384 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 ASB7Q9H672 318 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 DPP3Q9NY33 737 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 ZMYM5Q9UJ78 669 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 SLC8A2Q9UPR5 921 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 C2CD2Q9Y426 696 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 SRPRBQ9Y5M8 271 aaKnown RBP10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 CLIC4Q9Y696 253 aa10.32□□□□□ -0.76
TRAPPC4-206ENST00000525303 TRDMT1O14717 391 aaKnown RBP10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 CUTAO60888 179 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 ATG13O75143 517 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 RNF40O75150 1001 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 TBCAO75347 108 aaKnown RBP10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 EGFP01133 1207 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 F11P03951 625 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 ARSAP15289 507 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 HMGA1P17096 107 aaKnown RBP10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 PLCG1P19174 1290 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 GPR15P49685 360 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 NLRP12P59046 1061 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 SMARCB1Q12824 385 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 MCM6Q14566 821 aa10.31□□□□□ -0.76
TRAPPC4-206ENST00000525303 FOXD4L6Q3SYB3 417 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms