RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 ABCG1P45844 678 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 ALDH1A3P47895 512 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 ID4P47928 161 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 ZNF788Q6ZQV5 615 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 CMIPQ8IY22 773 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 LMBR1Q8WVP7 490 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 AUTS2Q8WXX7 1259 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 USP7Q93009 1102 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 MARS2Q96GW9 593 aaKnown RBP5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 IFT122Q9HBG6 1241 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 HSFX1Q9UBD0 423 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 RNF7Q9UBF6 113 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 ABT1Q9ULW3 272 aaKnown RBP5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 DMTF1Q9Y222 760 aa5.23□□□□□ -1.57
NSMCE2-211ENST00000523549 KIAA0100Q14667 2235 aaKnown RBP5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 FOLR3P41439 243 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 SLC6A9P48067 706 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 CCT2P78371 535 aaKnown RBP5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 ANO4Q32M45 955 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 ZNF529Q6P280 563 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 FOXR2Q6PJQ5 311 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 FAM180AQ6UWF9 173 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 RNF180Q86T96 592 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 COLGALT2Q8IYK4 626 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 SMG7Q92540 1137 aaKnown RBP5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 UROC1Q96N76 676 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 IFT22Q9H7X7 185 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 IL17RBQ9NRM6 502 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 LANCL2Q9NS86 450 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 DOT1LQ8TEK3 1739 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 SLIT3O75094 1523 aa5.22□□□□□ -1.57
NSMCE2-211ENST00000523549 RBBP6Q7Z6E9 1792 aaKnown RBP5.21□□□□□ -1.57
NSMCE2-211ENST00000523549 ADAMTSL1Q8N6G6 1762 aa5.21□□□□□ -1.57
NSMCE2-211ENST00000523549 AKAP11Q9UKA4 1901 aa5.21□□□□□ -1.57
NSMCE2-211ENST00000523549 HTTP42858 3142 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 PROB1E7EW31 1015 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 DPEP1P16444 411 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 WT1P19544 449 aaPredicted RBP5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 PCSK1P29120 753 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 PER3P56645 1201 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 NOMO3P69849 1222 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 NOMO1Q15155 1222 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 MUM1L1Q5H9M0 696 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 NOMO2Q5JPE7 1267 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 SSH3Q8TE77 659 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 NUP133Q8WUM0 1156 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 MED15Q96RN5 788 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 UHRF1Q96T88 793 aaPredicted RBP5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 SENP6Q9GZR1 1112 aaPredicted RBP5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 LDAHQ9H6V9 325 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 ASB6Q9NWX5 421 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 AJAP1Q9UKB5 411 aaPredicted RBP5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 MTO1Q9Y2Z2 717 aaKnown RBP5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 ENTPD2Q9Y5L3 495 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 ACTL7AQ9Y615 435 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 ABCC6O95255 1503 aa5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 KDM6AO15550 1401 aaPredicted RBP5.21□□□□□ -1.58
NSMCE2-211ENST00000523549 ANKRD30BQ9BXX2 1392 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 MCAMP43121 646 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 SRSF4Q08170 494 aaKnown RBP5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 SEPT2Q15019 361 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 GEN1Q17RS7 908 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 UBE3BQ7Z3V4 1068 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 C9orf106Q8NAJ2 232 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 ZNF778Q96MU6 729 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 PNKPQ96T60 521 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 TTC1Q99614 292 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 SLC29A3Q9BZD2 475 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 DMRT3Q9NQL9 472 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 KIF1BO60333 1816 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 SCN4AP35499 1836 aa5.2□□□□□ -1.58
NSMCE2-211ENST00000523549 GOLGA8AA7E2F4 631 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 CA12O43570 354 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 SRGNP10124 158 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 MTHFD2P13995 350 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 GYS2P54840 703 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 ATP8B2P98198 1209 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 SLFN5Q08AF3 891 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 SF3B3Q15393 1217 aaKnown RBP5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 VWA1Q6PCB0 445 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 DDX46Q7L014 1031 aaKnown RBP5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 NPM2Q86SE8 214 aaKnown RBP5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 FITM2Q8N6M3 262 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 TGFBRAP1Q8WUH2 860 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 DPF1Q92782 380 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 CYFIP2Q96F07 1278 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 HEPHQ9BQS7 1158 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 ACE2Q9BYF1 805 aaPredicted RBP5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 QRSL1Q9H0R6 528 aaKnown RBP5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 GSTO2Q9H4Y5 243 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 TMEM140Q9NV12 185 aa5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 APOBEC2Q9Y235 224 aaKnown RBP5.19□□□□□ -1.58
NSMCE2-211ENST00000523549 GPRASP1Q5JY77 1395 aa5.18□□□□□ -1.58
NSMCE2-211ENST00000523549 C4BP0C0L5 1744 aa5.18□□□□□ -1.58
NSMCE2-211ENST00000523549 MPPED1O15442 326 aa5.18□□□□□ -1.58
NSMCE2-211ENST00000523549 TEX33O43247 280 aa5.18□□□□□ -1.58
NSMCE2-211ENST00000523549 PROM1O43490 865 aa5.18□□□□□ -1.58
NSMCE2-211ENST00000523549 PEX1O43933 1283 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms