RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 ADGRG5Q8IZF4 528 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 ASB10Q8WXI3 467 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 SNX19Q92543 992 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 TMEM125Q96AQ2 219 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 HEPHQ9BQS7 1158 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 INTS13Q9NVM9 706 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 HESX1Q9UBX0 185 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.32□□□□□ -1.24
CPNE3-206ENST00000523469 RAD54BQ9Y620 910 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 PREX1Q8TCU6 1659 aa7.32□□□□□ -1.24
CPNE3-206ENST00000523469 USP19O94966 1318 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 BTN3A1O00481 513 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 TBX3O15119 743 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 TBC1D4O60343 1298 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 CAND2O75155 1236 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 ITGAMP11215 1152 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 MYF5P13349 255 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 ACVRL1P37023 503 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 ZEB1P37275 1124 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-206ENST00000523469 GDF5P43026 501 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 TOB1P50616 345 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-206ENST00000523469 LMBRD2Q68DH5 695 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-206ENST00000523469 LCORLQ8N3X6 602 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 LARP4BQ92615 738 aaKnown RBP7.31□□□□□ -1.24
CPNE3-206ENST00000523469 APIPQ96GX9 242 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 MOGAT1Q96PD6 335 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 SPATA5L1Q9BVQ7 753 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 SARGQ9BW04 601 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 TESQ9UGI8 421 aaKnown RBP7.31□□□□□ -1.24
CPNE3-206ENST00000523469 TMX2Q9Y320 296 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 PAXBP1Q9Y5B6 917 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 MAGI3Q5TCQ9 1506 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 TNIKQ9UKE5 1360 aa7.31□□□□□ -1.24
CPNE3-206ENST00000523469 UHRF1BP1LA0JNW5 1464 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 CD109Q6YHK3 1445 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 MYO1CO00159 1063 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 TRIM27P14373 513 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 NPTX2P47972 431 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 SLC11A2P49281 568 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 TBX4P57082 545 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 PURAQ00577 322 aaKnown RBP7.3□□□□□ -1.24
CPNE3-206ENST00000523469 LONRF3Q496Y0 759 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 NEU4Q8WWR8 484 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-206ENST00000523469 PTCD3Q96EY7 689 aaKnown RBP7.3□□□□□ -1.24
CPNE3-206ENST00000523469 PRRX2Q99811 253 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 SMOC2Q9H3U7 446 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 XPR1Q9UBH6 696 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 FER1L4A9Z1Z3 1794 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 STRCQ7RTU9 1775 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 BIVM-ERCC5R4GMW8 1640 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 WDR7Q9Y4E6 1490 aa7.3□□□□□ -1.24
CPNE3-206ENST00000523469 UACAQ9BZF9 1416 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 KDM5BQ9UGL1 1544 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 ATXN1LP0C7T5 689 aaKnown RBP7.29□□□□□ -1.24
CPNE3-206ENST00000523469 BRAFP15056 766 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 CHRM3P20309 590 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 ITGALP20701 1170 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 GATA3P23771 443 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 VIPR2P41587 438 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 GCLCP48506 637 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-206ENST00000523469 NDUFV1P49821 464 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 SUMO3P55854 103 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-206ENST00000523469 UCP3P55916 312 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 SLC13A2Q13183 592 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 RAB32Q13637 225 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 CNGA2Q16280 664 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 CCAR1Q8IX12 1150 aaKnown RBP7.29□□□□□ -1.24
CPNE3-206ENST00000523469 FAM9AQ8IZU1 332 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-206ENST00000523469 AMER2Q8N7J2 671 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 DNAJC5GQ8N7S2 189 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 SLC46A1Q96NT5 459 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 NUP62CLQ9H1M0 184 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 CYP4F11Q9HBI6 524 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 KIAA1586Q9HCI6 787 aa7.29□□□□□ -1.24
CPNE3-206ENST00000523469 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-206ENST00000523469 A0A087WWL8 130 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 A0A0B4J269 797 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 F5H697 171 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 CYR61O00622 381 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 TRIAP1O43715 76 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 FSHBP01225 129 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 KRT18P05783 430 aaKnown RBP7.28□□□□□ -1.24
CPNE3-206ENST00000523469 HKR1P10072 659 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 CYP2C9P11712 490 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 RPL17P18621 184 aaKnown RBP7.28□□□□□ -1.24
CPNE3-206ENST00000523469 TGM1P22735 817 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 CTBP1Q13363 440 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 TUBB3Q13509 450 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 BOP1Q14137 746 aaKnown RBP7.28□□□□□ -1.24
CPNE3-206ENST00000523469 IQCB1Q15051 598 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 SLC44A4Q53GD3 710 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 COBLL1Q53SF7 1204 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 ZNF627Q7L945 461 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 VRK3Q8IV63 474 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 LNX2Q8N448 690 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 SSH3Q8TE77 659 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 COQ10AQ96MF6 247 aa7.28□□□□□ -1.24
CPNE3-206ENST00000523469 OSBPL9Q96SU4 736 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms