RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 STXBP4Q6ZWJ1 553 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 MON1AQ86VX9 555 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 GPD1LQ8N335 351 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 DCLK2Q8N568 766 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 ZNF507Q8TCN5 953 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 FAM200AQ8TCP9 573 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 SAAL1Q96ER3 474 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 TRMT2BQ96GJ1 504 aaKnown RBP13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 FUBP3Q96I24 572 aaKnown RBP eCLIP13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 CBWD1Q9BRT8 395 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 FGFBP2Q9BYJ0 223 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 KIAA1586Q9HCI6 787 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 INTS13Q9NVM9 706 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 SIX4Q9UIU6 781 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 L1RE1Q9UN81 338 aa13.6□□□□□ -0.23
TOP1MT-217ENST00000523417 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 SPTLC2O15270 562 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 EIF3DO15371 548 aaKnown RBP eCLIP13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 NOL4O94818 638 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 PRPF6O94906 941 aaKnown RBP13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 PRAMEF12O95522 483 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 ITGB3P05106 788 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 SDHBP21912 280 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 HOXD13P35453 343 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 RPL10AP62906 217 aaKnown RBP13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 MYL7Q01449 175 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 CCINQ13939 588 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 TAF12Q16514 161 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 SOWAHAQ2M3V2 549 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 WDR44Q5JSH3 913 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 INTS6LQ5JSJ4 861 aaKnown RBP13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 SCARA3Q6AZY7 606 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 TXNDC11Q6PKC3 985 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 TSSK4Q6SA08 328 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 EPM2AIP1Q7L775 607 aaPredicted RBP13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 GIPC2Q8TF65 315 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 SECISBP2LQ93073 1101 aaKnown RBP13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 SNX21Q969T3 373 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 ZNF396Q96N95 335 aaPredicted RBP13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 GCNAQ96QF7 691 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 C7orf25Q9BPX7 421 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 TRIM9Q9C026 710 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 KIF9Q9HAQ2 790 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 PDE11AQ9HCR9 933 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 DDX43Q9NXZ2 648 aaKnown RBP13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 GTSE1Q9NYZ3 720 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 CACNA1AO00555 2505 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 SCN1AP35498 2009 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 COL4A2P08572 1712 aa13.59□□□□□ -0.23
TOP1MT-217ENST00000523417 MIA3Q5JRA6 1907 aa13.58□□□□□ -0.23
TOP1MT-217ENST00000523417 SLC38A8A6NNN8 435 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 PRR5-ARHGAP8B1AHC4 643 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 TRDMT1O14717 391 aaKnown RBP13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 CUTAO60888 179 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 YEATS4O95619 227 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 PCSK1P29120 753 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 MAGEA11P43364 429 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 ARHGAP8P85298 464 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 CYP4F8P98187 520 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 EHHADHQ08426 723 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 MYO1EQ12965 1108 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 DUOXA2Q1HG44 320 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 ITPRIPL2Q3MIP1 535 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 GPIHBP1Q8IV16 184 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 IQUBQ8NA54 791 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 USP13Q92995 863 aaPredicted RBP13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 PCIF1Q9H4Z3 704 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 GKN1Q9NS71 199 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 TDP1Q9NUW8 608 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 ABI2Q9NYB9 513 aaPredicted RBP13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 UXTQ9UBK9 157 aaPredicted RBP13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 SMG5Q9UPR3 1016 aaKnown RBP13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 WDR87Q6ZQQ6 2873 aa13.58□□□□□ -0.24
TOP1MT-217ENST00000523417 CCDC163A0A0D9SF12 145 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 GOLGA8IPA6NC78 632 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 GOLGA8JA6NMD2 632 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 K7ESF4 209 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 LRP3O75074 770 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 TCF3P15923 654 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 CYP2F1P24903 491 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 AVPR1AP37288 418 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 SOX9P48436 509 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 AMPD2Q01433 879 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 SATB1Q01826 763 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 RUNX3Q13761 415 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 STK38Q15208 465 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 ATL3Q6DD88 541 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 LAIR1Q6GTX8 287 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 LONP2Q86WA8 852 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 PDILTQ8N807 584 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 KIAA1958Q8N8K9 716 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 MRPS31Q92665 395 aaKnown RBP13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 ANKRD36BP1Q96IX9 119 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 ZFYVE19Q96K21 471 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 SPATA17Q96L03 361 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 PI4K2AQ9BTU6 479 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 MAGEF1Q9HAY2 307 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
TOP1MT-217ENST00000523417 TFIP11Q9UBB9 837 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms