RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CCDC192P0DO97 292 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 TRIM21P19474 475 aaKnown RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 MXI1P50539 228 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 NOP14P78316 857 aaKnown RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 WDR72Q3MJ13 1102 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 PABPC1LQ4VXU2 614 aaKnown RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 SLC39A12Q504Y0 691 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 LMBRD2Q68DH5 695 aaPredicted RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 IQCEQ6IPM2 695 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 EP400NLQ6ZTU2 488 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 FAM114A1Q8IWE2 563 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 ELOVL4Q9GZR5 314 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 PIDD1Q9HB75 910 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 PNPLA8Q9NP80 782 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 SLC2A4RGQ9NR83 387 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 RAB20Q9NX57 234 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 UXTQ9UBK9 157 aaPredicted RBP10.11□□□□□ -0.79
CLK4-209ENST00000521621 SORCS3Q9UPU3 1222 aa10.11□□□□□ -0.79
CLK4-209ENST00000521621 RHOP08100 348 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 TBXAS1P24557 533 aaPredicted RBP10.1□□□□□ -0.79
CLK4-209ENST00000521621 PIK3CAP42336 1068 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 YWHAEP62258 255 aaKnown RBP10.1□□□□□ -0.79
CLK4-209ENST00000521621 ZXDAP98168 799 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 TWF1Q12792 350 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 BIRC3Q13489 604 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 HTR4Q13639 388 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 ZNF268Q14587 947 aaPredicted RBP10.1□□□□□ -0.79
CLK4-209ENST00000521621 MEA1Q16626 185 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 SCARA3Q6AZY7 606 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 TMEM209Q96SK2 561 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 MRPL45Q9BRJ2 306 aaKnown RBP10.1□□□□□ -0.79
CLK4-209ENST00000521621 CRISPLD1Q9H336 500 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 CSNK1G1Q9HCP0 422 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 CRTAC1Q9NQ79 661 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 MAGEC2Q9UBF1 373 aaPredicted RBP10.1□□□□□ -0.79
CLK4-209ENST00000521621 MOSPD3O75425 235 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 CSH1P0DML2 217 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 CSH2P0DML3 217 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 PTPN1P18031 435 aaKnown RBP10.1□□□□□ -0.79
CLK4-209ENST00000521621 CDC25CP30307 473 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 FMO5P49326 533 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 VEPH1Q14D04 833 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 CCDC183Q5T5S1 534 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 ZNF276Q8N554 614 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 LMO3Q8TAP4 145 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 TAS1R2Q8TE23 839 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 ELSPBP1Q96BH3 223 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 MED15Q96RN5 788 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 KCNH6Q9H252 994 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 ASAH2Q9NR71 780 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 KIAA1257Q9ULG3 409 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 CNTN6Q9UQ52 1028 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 CTNND2Q9UQB3 1225 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 NME7Q9Y5B8 376 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 CDH23Q9H251 3354 aa10.1□□□□□ -0.79
CLK4-209ENST00000521621 LAMA2P24043 3122 aaKnown RBP10.1□□□□□ -0.79
CLK4-209ENST00000521621 FAM92AA1XBS5 289 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 TRIM49BA6NDI0 452 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 CCL16O15467 120 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 CILPO75339 1184 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 CSPG5O95196 566 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 LETM1O95202 739 aaPredicted RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 SPATA31D3P0C874 917 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 ATF6P18850 670 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 PDE6CP51160 858 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 CETN1Q12798 172 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 DUSP4Q13115 394 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 CYP4A22Q5TCH4 519 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 SNX30Q5VWJ9 437 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 SPATA31D4Q6ZUB0 917 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 GRASPQ7Z6J2 395 aaPredicted RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 ENOX1Q8TC92 643 aaKnown RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 MYADMQ96S97 322 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 BPIFA3Q9BQP9 254 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 TMLHEQ9NVH6 421 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 DUSP12Q9UNI6 340 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 HMGA1P17096 107 aaKnown RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 GCLMP48507 274 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 GCNT1Q02742 428 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 ENOSF1Q7L5Y1 443 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 SPATA2LQ8IUW3 424 aaPredicted RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 NPAS3Q8IXF0 933 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 B3GALNT2Q8NCR0 500 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 HNRNPABQ99729 332 aaKnown RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 SDCBP2Q9H190 292 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 IL21Q9HBE4 155 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 APOBEC3GQ9HC16 384 aaKnown RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 TCF20Q9UGU0 1960 aaKnown RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 TRIM49P0CI25 452 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 TRIM49CP0CI26 452 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 LMO2P25791 158 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 SIGLEC14Q08ET2 396 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 MTMR3Q13615 1198 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 WDR44Q5JSH3 913 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 PDZD4Q76G19 769 aaPredicted RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 DNAJB7Q7Z6W7 309 aaPredicted RBP10.09□□□□□ -0.79
CLK4-209ENST00000521621 GLYCTKQ8IVS8 523 aa10.09□□□□□ -0.79
CLK4-209ENST00000521621 ERCC4Q92889 916 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms