RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 PJA1Q8NG27 643 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 TCEAL4Q96EI5 215 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 BICD1Q96G01 975 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 TSPAN18Q96SJ8 248 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 KXD1Q9BQD3 176 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 CORO1BQ9BR76 489 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 PLA2G2FQ9BZM2 168 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 RPF1Q9H9Y2 349 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 UBQLN1Q9UMX0 589 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 INSL5Q9Y5Q6 135 aa10.07□□□□□ -0.8
CTNNA1-221ENST00000520339 KMT2EQ8IZD2 1858 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 KANSL1LA0AUZ9 987 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 ZNF197O14709 1029 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 LRRN2O75325 713 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 MOSPD3O75425 235 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 VNN2O95498 520 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 AVPP01185 164 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 FCARP24071 287 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 MZF1P28698 734 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 CCR2P41597 374 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 MATR3P43243 847 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 EPHA5P54756 1037 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 GTF2BQ00403 316 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 YWHAHQ04917 246 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 PPP2R3AQ06190 1150 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 PTPAQ15257 358 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 FAM78AQ5JUQ0 283 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 SPECC1Q5M775 1068 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 SPATA1Q5VX52 437 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 USP49Q70CQ1 688 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 C1orf210Q8IVY1 113 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 ELSPBP1Q96BH3 223 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 MRRFQ96E11 262 aaKnown RBP10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 DMRTB1Q96MA1 342 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 OXCT2Q9BYC2 517 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 OSBPL6Q9BZF3 934 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 TIMMDC1Q9NPL8 285 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 CEP72Q9P209 647 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 CPSF3Q9UKF6 684 aaKnown RBP10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 MTF2Q9Y483 593 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 TIMM13Q9Y5L4 95 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 DENND4AQ7Z401 1863 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 GPR179Q6PRD1 2367 aa10.06□□□□□ -0.8
CTNNA1-221ENST00000520339 OR6C75A6NL08 312 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 SHISA7A6NL88 538 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 FAM170BA6NMN3 283 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 ANKRD63C9JTQ0 380 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 K7ENM7 598 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 PPEF2O14830 753 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 HNRNPDLO14979 420 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 XPOTO43592 962 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 SP9P0CG40 484 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 TYMPP19971 482 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 NMT1P30419 496 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 LILRA4P59901 499 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 TWF1Q12792 350 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 HIF1AQ16665 826 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 CYP4A22Q5TCH4 519 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 IQCEQ6IPM2 695 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 PDZD4Q76G19 769 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 MAP4K3Q8IVH8 894 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 CD302Q8IX05 232 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 MAML2Q8IZL2 1156 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 ADSSL1Q8N142 457 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 LARP4BQ92615 738 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 EPSTI1Q96J88 318 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 ZNF512Q96ME7 567 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 ZSWIM3Q96MP5 696 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 MSTO1Q9BUK6 570 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 LRRC3Q9BY71 257 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 CRISPLD1Q9H336 500 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 SEMA4AQ9H3S1 761 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 ST6GALNAC4Q9H4F1 302 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 ZHX3Q9H4I2 956 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 NEUROD4Q9HD90 331 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 LTB4R2Q9NPC1 389 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 CLIC4Q9Y696 253 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 STYXL1Q9Y6J8 313 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 EP300Q09472 2414 aaPredicted RBP10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 GVINP1Q7Z2Y8 2422 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 DOCK8Q8NF50 2099 aa10.05□□□□□ -0.8
CTNNA1-221ENST00000520339 PLXNA3P51805 1871 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 ANO9A1A5B4 782 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 TISP43B9A030 160 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 PIRO00625 290 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 TBCAO75347 108 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 PDGFAP04085 211 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 KRT18P05783 430 aaKnown RBP10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 OR4Q2P0C623 313 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 CPB1P15086 417 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 CD72P21854 359 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 PAX3P23760 479 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 ABCD1P33897 745 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 DUSP4Q13115 394 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 GPR17Q13304 367 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 FZD5Q13467 585 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
CTNNA1-221ENST00000520339 ZC2HC1CQ53FD0 456 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms