RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 HS3ST3A1Q9Y663 406 aa7.55□□□□□ -1.2
PTPN12-213ENST00000519553 A0A0B4J269 797 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 F8W8V4 182 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 SRGNP10124 158 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 RPL17P18621 184 aaKnown RBP7.54□□□□□ -1.2
PTPN12-213ENST00000519553 LILRA4P59901 499 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 TUBB3Q13509 450 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 IQCB1Q15051 598 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 LCE5AQ5TCM9 118 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 TMEM108Q6UXF1 575 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 ULK2Q8IYT8 1036 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 SLC30A5Q8TAD4 765 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 LPIN2Q92539 896 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 PTCD3Q96EY7 689 aaKnown RBP7.54□□□□□ -1.2
PTPN12-213ENST00000519553 CORO2BQ9UQ03 480 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 PAXBP1Q9Y5B6 917 aa7.54□□□□□ -1.2
PTPN12-213ENST00000519553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.54□□□□□ -1.2
PTPN12-213ENST00000519553 CCDC194A0A1B0GVG4 234 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 MYO1CO00159 1063 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 PROM1O43490 865 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 PPP3CBP16298 524 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 TGM1P22735 817 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 SF3B3Q15393 1217 aaKnown RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 SLC44A4Q53GD3 710 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 RBM20Q5T481 1227 aaKnown RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 VPS53Q5VIR6 699 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 MPP5Q8N3R9 675 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 NEU4Q8WWR8 484 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 LINC00476Q8WZB0 136 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 Q96MF0 132 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 MOGAT1Q96PD6 335 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 KRTAP4-11Q9BYQ6 195 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 SCAND2PQ9GZW5 306 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 MS4A7Q9GZW8 240 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 A1CFQ9NQ94 594 aaKnown RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 CHST12Q9NRB3 414 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 KCTD5Q9NXV2 234 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 TESQ9UGI8 421 aaKnown RBP7.53□□□□□ -1.2
PTPN12-213ENST00000519553 COL4A3Q01955 1670 aa7.53□□□□□ -1.2
PTPN12-213ENST00000519553 RHPN2P1A8MT19 583 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 F5H697 171 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 PYCARD-AS1I3L0S3 204 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 CYP2C9P11712 490 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 IL1R1P14778 569 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 ZKSCAN1P17029 563 aaPredicted RBP7.52□□□□□ -1.21
PTPN12-213ENST00000519553 KLRC1P26715 233 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 CASP5P51878 434 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 HNRNPMP52272 730 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPN12-213ENST00000519553 BLOC1S1P78537 153 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 HTRA4P83105 476 aaPredicted RBP7.52□□□□□ -1.21
PTPN12-213ENST00000519553 ZIK1Q3SY52 487 aaPredicted RBP7.52□□□□□ -1.21
PTPN12-213ENST00000519553 IL31Q6EBC2 164 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 ZNF280BQ86YH2 543 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 AMER2Q8N7J2 671 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 BEND2Q8NDZ0 799 aa7.52□□□□□ -1.21
PTPN12-213ENST00000519553 KPNA5O15131 536 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 TRIAP1O43715 76 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 MYL3P08590 195 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 CD6P30203 668 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 TM4SF4P48230 202 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 PXNP49023 591 aaPredicted RBP7.51□□□□□ -1.21
PTPN12-213ENST00000519553 PRIM2P49643 509 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 NEK3P51956 506 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 KLF10Q13118 480 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 VWA1Q6PCB0 445 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 LCORLQ8N3X6 602 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.51□□□□□ -1.21
PTPN12-213ENST00000519553 MYCBPAPQ8TBZ2 947 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 RAPGEF4Q8WZA2 1011 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 STRBPQ96SI9 672 aaKnown RBP7.51□□□□□ -1.21
PTPN12-213ENST00000519553 UNKQ9C0B0 810 aaKnown RBP7.51□□□□□ -1.21
PTPN12-213ENST00000519553 CASS4Q9NQ75 786 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 RGS17Q9UGC6 210 aaPredicted RBP7.51□□□□□ -1.21
PTPN12-213ENST00000519553 SHOC2Q9UQ13 582 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 SNX13Q9Y5W8 968 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 EPN1Q9Y6I3 576 aaPredicted RBP7.51□□□□□ -1.21
PTPN12-213ENST00000519553 MAST3O60307 1309 aa7.51□□□□□ -1.21
PTPN12-213ENST00000519553 FOXN3O00409 490 aaPredicted RBP7.5□□□□□ -1.21
PTPN12-213ENST00000519553 NBPF7P0C2Y1 421 aaPredicted RBP7.5□□□□□ -1.21
PTPN12-213ENST00000519553 XRCC6P12956 609 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPN12-213ENST00000519553 PPIFP30405 207 aaKnown RBP7.5□□□□□ -1.21
PTPN12-213ENST00000519553 ZNF543Q08ER8 600 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 LAYNQ6UX15 382 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 ZDHHC24Q6UX98 284 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 TSHZ1Q6ZSZ6 1077 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 LDLRAD3Q86YD5 345 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 SLC44A3Q8N4M1 653 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 SPSB4Q96A44 273 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 COQ10AQ96MF6 247 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 AIFM2Q9BRQ8 373 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 PTDSS2Q9BVG9 487 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 AMBRA1Q9C0C7 1298 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 ING1Q9UK53 422 aaPredicted RBP7.5□□□□□ -1.21
PTPN12-213ENST00000519553 SSX2IPQ9Y2D8 614 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 TBC1D30Q9Y2I9 924 aa7.5□□□□□ -1.21
PTPN12-213ENST00000519553 HKR1P10072 659 aa7.49□□□□□ -1.21
PTPN12-213ENST00000519553 TSHRP16473 764 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms