RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 OSBP2Q969R2 916 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 FERMT2Q96AC1 680 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 PGBD4Q96DM1 585 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 LRGUKQ96M69 825 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 TOX2Q96NM4 488 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 MTMR9Q96QG7 549 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 MMS19Q96T76 1030 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 TSG101Q99816 390 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CTRCQ99895 268 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCDC113Q9H0I3 377 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 LRMDAQ9H2I8 198 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 SEMA4AQ9H3S1 761 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 EHMT1Q9H9B1 1298 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 MRPL44Q9H9J2 332 aaKnown RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 GDF3Q9NR23 364 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 AIPL1Q9NZN9 384 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 EMC3Q9P0I2 261 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 HMG20BQ9P0W2 317 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 TNFRSF10DQ9UBN6 386 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 TJP2Q9UDY2 1190 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 STXBP5LQ9Y2K9 1186 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 DIS3Q9Y2L1 958 aaKnown RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 NFE2L3Q9Y4A8 694 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 EID1Q9Y6B2 187 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CFTRP13569 1480 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 MAGI2Q86UL8 1455 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 BCL9O00512 1426 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 TRAPPC8Q9Y2L5 1435 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MAP3K15Q6ZN16 1313 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 KDM6BO15054 1643 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 RNF17Q9BXT8 1623 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 C2orf81A6NN90 581 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 FAM155AB1AL88 458 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 KPNA4O00629 521 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 TRAFD1O14545 582 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 AP1G1O43747 822 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 GRIN3BO60391 1043 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 SNX3O60493 162 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MFAP3LO75121 409 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CILPO75339 1184 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF254O75437 659 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZWINTO95229 277 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CST3P01034 146 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 KRT16P08779 473 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ALOX5P09917 674 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 OCM2P0CE71 109 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 OCMP0CE72 109 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CALM1P0DP23 149 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CALM2P0DP24 149 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CALM3P0DP25 149 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PYGMP11217 842 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CHRNB1P11230 501 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDK4P11802 303 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MARK3P27448 753 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CRABP2P29373 138 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 GNA11P29992 359 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDC25CP30307 473 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PRKAR1BP31321 381 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CTNNA1P35221 906 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 LONP1P36776 959 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 EIF2B2P49770 351 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ADKP55263 362 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ATP6V0D1P61421 351 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 S100A12P80511 92 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDR2Q01850 454 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 GALNT1Q10472 559 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MED21Q13503 144 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 TSC22D1Q15714 1073 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CLUL1Q15846 466 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 RGS21Q2M5E4 152 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MYLK3Q32MK0 819 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 DPCR1Q3MIW9 517 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 SNX30Q5VWJ9 437 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 METTL21CQ5VZV1 264 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 FAM122CQ6P4D5 195 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 DHRS4L2Q6PKH6 230 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MPZL3Q6UWV2 235 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 DSTYKQ6XUX3 929 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 INTS8Q75QN2 995 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ANO5Q75V66 913 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCDC84Q86UT8 332 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 HEATR4Q86WZ0 1026 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 SNX32Q86XE0 403 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MMAAQ8IVH4 418 aaKnown RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 HACE1Q8IYU2 909 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 LSMEM1Q8N8F7 131 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 MFSD2AQ8NA29 543 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PDZD8Q8NEN9 1154 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 SPATA4Q8NEY3 305 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 BRSK1Q8TDC3 778 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZFPM2Q8WW38 1151 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 GAB3Q8WWW8 586 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF75CPQ92670 426 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PMM1Q92871 262 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 PEX13Q92968 403 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 RILPL2Q969X0 211 aa5.06□□□□□ -1.6
HMGB1P19-201ENST00000517578 GIMAP5Q96F15 307 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 238.5 ms