RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 FNTBP49356 437 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 RPL10AP62906 217 aaKnown RBP15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 MYL7Q01449 175 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 TNK2Q07912 1038 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 BFSP1Q12934 665 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 RESTQ13127 1097 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 LPAL2Q16609 132 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 WDR44Q5JSH3 913 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 PDCL2Q8N4E4 241 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 C1orf127Q8N9H9 656 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 TTC8Q8TAM2 541 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 EXOC4Q96A65 974 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SAAL1Q96ER3 474 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 ACBD6Q9BR61 282 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 IKZF4Q9H2S9 585 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 PARD6AQ9NPB6 346 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 AGAP1Q9UPQ3 857 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 SPTBN2O15020 2390 aa15.71■□□□□ 0.11
SCARNA20.5-201ENST00000516991 FRMD3A2A2Y4 597 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PRPF40AO75400 957 aaKnown RBP15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 F11P03951 625 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 IDEP14735 1019 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 HMGA1P17096 107 aaKnown RBP15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PCSK1P29120 753 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ATXN1P54253 815 aaKnown RBP15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 AMPD2Q01433 879 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 KCNA1Q09470 495 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SPEM2Q0P670 501 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ZNF268Q14587 947 aaPredicted RBP15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 INTS6LQ5JSJ4 861 aaKnown RBP15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 WDR5BQ86VZ2 330 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 NETO1Q8TDF5 533 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TRMT2BQ96GJ1 504 aaKnown RBP15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TMEM206Q9H813 350 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GKN1Q9NS71 199 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TDP1Q9NUW8 608 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GDAP2Q9NXN4 497 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 DDX43Q9NXZ2 648 aaKnown RBP15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TBC1D7Q9P0N9 293 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 L1RE1Q9UN81 338 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 RALGAPA1Q6GYQ0 2036 aa15.7■□□□□ 0.1
SCARNA20.5-201ENST00000516991 EXTL3O43909 919 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ATG13O75143 517 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TMEM191BP0C7N4 346 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 LHX1P48742 406 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 RBP5P82980 135 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 DMWDQ09019 674 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GRSF1Q12849 480 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 RUNX3Q13761 415 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PDGFRLQ15198 375 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CC2D1AQ6P1N0 951 aaPredicted RBP15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CEP68Q76N32 757 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TMEM150AQ86TG1 271 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MON1AQ86VX9 555 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CCDC65Q8IXS2 484 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TOP6BLQ8N6T0 577 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MAB21L3Q8N8X9 362 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 USP13Q92995 863 aaPredicted RBP15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FUBP3Q96I24 572 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CLIC6Q96NY7 704 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 FAM83CQ9BQN1 747 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PI4K2AQ9BTU6 479 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SMG9Q9H0W8 520 aaKnown RBP15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PANK4Q9NVE7 773 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TMLHEQ9NVH6 421 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MAGED2Q9UNF1 606 aaPredicted RBP15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 R3HCC1Q9Y3T6 440 aaKnown RBP15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SPAG17Q6Q759 2223 aa15.69■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CCDC163A0A0D9SF12 145 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TULP1O00294 542 aaPredicted RBP15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 HRO43593 1189 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 NOL4O94818 638 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CDR1P51861 262 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CASP5P51878 434 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 WNT7BP56706 349 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CSRP2Q16527 193 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CFAP221Q4G0U5 840 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TMEM196Q5HYL7 178 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 HEATR6Q6AI08 1181 aaKnown RBP15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ADGRF2Q8IZF7 708 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CSGALNACT2Q8N6G5 542 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 ANKRD36BP1Q96IX9 119 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MYRFLQ96LU7 910 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 PKMYT1Q99640 499 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 HPS4Q9NQG7 708 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SEMA4GQ9NTN9 838 aa15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TPRP12270 2363 aaKnown RBP15.68■□□□□ 0.1
SCARNA20.5-201ENST00000516991 DNAH14Q0VDD8 3507 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TRDMT1O14717 391 aaKnown RBP15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SLC30A4O14863 429 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 KRT19P08727 400 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SYT1P21579 422 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 GPR15P49685 360 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 CEBPZQ03701 1054 aaKnown RBP15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 MYO1EQ12965 1108 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SLC39A14Q15043 492 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 SURF1Q15526 300 aa15.67■□□□□ 0.1
SCARNA20.5-201ENST00000516991 TXNDC8Q6A555 127 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms