RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 EPHX3Q9H6B9 360 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 ABCB6Q9NP58 842 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 CRTAC1Q9NQ79 661 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 RAB20Q9NX57 234 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 ABI2Q9NYB9 513 aaPredicted RBP11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 CDH7Q9ULB5 785 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 YIPF1Q9Y548 306 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 NME7Q9Y5B8 376 aa11.92□□□□□ -0.5
SCARNA20-201ENST00000516768 MYO10Q9HD67 2058 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 A8MXQ7 604 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 DCXO43602 365 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 SOAT2O75908 522 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 GNA14O95837 355 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 CYP2F1P24903 491 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 PIK3CAP42336 1068 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 NLRP12P59046 1061 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 SLC5A9Q2M3M2 681 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 MGAT5BQ3V5L5 792 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 CBWD6Q4V339 395 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 CT47A1Q5JQC4 288 aaPredicted RBP11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 CBWD3Q5JTY5 395 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 PRSS36Q5K4E3 855 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 CBWD5Q5RIA9 395 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 TCERG1LQ5VWI1 586 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 SPOPLQ6IQ16 392 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 RBM43Q6ZSC3 357 aaKnown RBP11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 HS6ST3Q8IZP7 471 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 CRYBG2Q8N1P7 616 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 LEMD2Q8NC56 503 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 MYCBPAPQ8TBZ2 947 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 PSMG2Q969U7 264 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 NXPE3Q969Y0 559 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 FUBP3Q96I24 572 aaKnown RBP eCLIP11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 SEPT5Q99719 369 aaPredicted RBP11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 SYT15Q9BQS2 421 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 BCO2Q9BYV7 579 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 IMPG2Q9BZV3 1241 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 SDCBP2Q9H190 292 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 MMRN2Q9H8L6 949 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 KCNK12Q9HB15 430 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 CYP3A43Q9HB55 503 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 APOBEC3GQ9HC16 384 aaKnown RBP11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 IGSF9Q9P2J2 1179 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 MAGEC2Q9UBF1 373 aaPredicted RBP11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 MUTYHQ9UIF7 546 aa11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 MRPS23Q9Y3D9 190 aaKnown RBP11.91□□□□□ -0.5
SCARNA20-201ENST00000516768 C2orf16Q68DN1 1984 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 ANHXE9PGG2 379 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 ATF6P18850 670 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 ERCC5P28715 1186 aaPredicted RBP11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 CCR2P41597 374 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 MAGEA11P43364 429 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 ASPAP45381 313 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 MXI1P50539 228 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 RPL10AP62906 217 aaKnown RBP11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 CCDC40Q4G0X9 1142 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 DCAF17Q5H9S7 520 aaPredicted RBP11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 WDR44Q5JSH3 913 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 POTEHQ6S545 545 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 C4orf50Q6ZRC1 276 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 PDZD4Q76G19 769 aaPredicted RBP11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 ITIH5Q86UX2 942 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 UNC93AQ86WB7 457 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 SPATA2LQ8IUW3 424 aaPredicted RBP11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 TRIM59Q8IWR1 403 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 CCDC150Q8NCX0 1101 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 EDAQ92838 391 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 TATDN2Q93075 761 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 TCEAL4Q96EI5 215 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 PCED1BQ96HM7 432 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 LPIN3Q9BQK8 851 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 SMYD3Q9H7B4 428 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 GDE1Q9NZC3 331 aa11.9□□□□□ -0.5
SCARNA20-201ENST00000516768 NOTCH4Q99466 2003 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 P4HA2O15460 535 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 MOSPD3O75425 235 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 MBD3O95983 291 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 ASGR2P07307 311 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 FMO5P49326 533 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 NDST1P52848 882 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 PSMC1P62191 440 aaKnown RBP11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 NOP14P78316 857 aaKnown RBP11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 ZXDAP98168 799 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 KCNH2Q12809 1159 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 PTPN21Q16825 1174 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 DDR2Q16832 855 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 DPCR1Q3MIW9 517 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 VSTM1Q6UX27 236 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 GAREM2Q75VX8 874 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 GET4Q7L5D6 327 aaPredicted RBP11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 TMC8Q8IU68 726 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 IRF2BP1Q8IU81 584 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 NPAS3Q8IXF0 933 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 SLC44A3Q8N4M1 653 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 B3GALNT2Q8NCR0 500 aa11.89□□□□□ -0.51
SCARNA20-201ENST00000516768 GPR152Q8TDT2 470 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms