RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 MCTP1Q6DN14 999 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 RINT1Q6NUQ1 792 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 PARM1Q6UWI2 310 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 MPZL3Q6UWV2 235 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 ALKAL1Q6UXT8 129 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 RSPO2Q6UXX9 243 aaPredicted RBP7.84□□□□□ -1.15
USP46-208ENST00000512656 FAM35AQ86V20 835 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 C1orf210Q8IVY1 113 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 ADSSL1Q8N142 457 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 ELMOD1Q8N336 334 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 Q8N3U1 123 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 APPL2Q8NEU8 664 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 ITFG1Q8TB96 612 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 FGF14Q92915 247 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 BORCS6Q96GS4 357 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 CDK5RAP3Q96JB5 506 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 SNX27Q96L92 541 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 NTPCRQ9BSD7 190 aaKnown RBP7.84□□□□□ -1.15
USP46-208ENST00000512656 CXCL16Q9H2A7 254 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 PTPRHQ9HD43 1115 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 KCND2Q9NZV8 630 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 ARHGAP28Q9P2N2 729 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 NAGPAQ9UK23 515 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 MAFFQ9ULX9 164 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 PCDHB6Q9Y5E3 794 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 CEP250Q9BV73 2442 aa7.84□□□□□ -1.15
USP46-208ENST00000512656 KANSL1LA0AUZ9 987 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 ARHGEF37A1IGU5 675 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 I3L4J1 428 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 SLC16A4O15374 487 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 NCAM2O15394 837 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 SLC26A4O43511 780 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 ABLIM3O94929 683 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 LMNAP02545 664 aaKnown RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 DCNP07585 359 aaKnown RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 HARSP12081 509 aaKnown RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 PLS3P13797 630 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 ATF2P15336 505 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 PROZP22891 400 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 MARCKSP29966 332 aaPredicted RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 BRCC3P46736 316 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 NOLC1Q14978 699 aaKnown RBP eCLIP7.83□□□□□ -1.16
USP46-208ENST00000512656 RABEP1Q15276 862 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 ZRSR1Q15695 479 aaKnown RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 MLF2Q15773 248 aaPredicted RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 KYAT1Q16773 422 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 SLC44A4Q53GD3 710 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 ARL6IP4Q66PJ3 421 aaKnown RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 IQCEQ6IPM2 695 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 SLC8B1Q6J4K2 584 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 ZPBP2Q6X784 338 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 C1orf186Q6ZWK4 172 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 TCEAL8Q8IYN2 117 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 DAW1Q8N136 415 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 CEP120Q8N960 986 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 PJA1Q8NG27 643 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 NUDT8Q8WV74 236 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 IFT43Q96FT9 208 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 NELL2Q99435 816 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 RUSC1Q9BVN2 902 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 BCO2Q9BYV7 579 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 OSBPL6Q9BZF3 934 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 GOLGA2P5Q9HBQ8 144 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 CNTN3Q9P232 1028 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 LARSQ9P2J5 1176 aaKnown RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 DNMT3BQ9UBC3 853 aaKnown RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 NOVA2Q9UNW9 492 aaKnown RBP7.83□□□□□ -1.16
USP46-208ENST00000512656 OTOGLQ3ZCN5 2332 aa7.83□□□□□ -1.16
USP46-208ENST00000512656 GPR179Q6PRD1 2367 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 PP2D1A8MPX8 630 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 H3BQV1 296 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 CLDN3O15551 220 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 XPOTO43592 962 aaKnown RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 ECI2O75521 394 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 RHOP08100 348 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 CLTAP09496 248 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 CDC25AP30304 524 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 ABCD1P33897 745 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 MCM4P33991 863 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 MATR3P43243 847 aaKnown RBP eCLIP7.82□□□□□ -1.16
USP46-208ENST00000512656 ARPP19P56211 112 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 ATP2C1P98194 919 aaPredicted RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 ROR1Q01973 937 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 SOX4Q06945 474 aaPredicted RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 MAPK7Q13164 816 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 SNW1Q13573 536 aaKnown RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 UBXN2BQ14CS0 331 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 CTXN3Q4LDR2 81 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 HYIQ5T013 277 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 CYP4A22Q5TCH4 519 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 ZNF280DQ6N043 979 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 CD300LGQ6UXG3 332 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 PDZD4Q76G19 769 aaPredicted RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 FMR1NBQ8N0W7 255 aaPredicted RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 SYT2Q8N9I0 419 aaPredicted RBP7.82□□□□□ -1.16
USP46-208ENST00000512656 LEMD2Q8NC56 503 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 C3orf58Q8NDZ4 430 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 TMEM161BQ8NDZ6 487 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 ING5Q8WYH8 240 aa7.82□□□□□ -1.16
USP46-208ENST00000512656 COL26A1Q96A83 441 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms