RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 ING5Q8WYH8 240 aa16.65■□□□□ 0.26
SH3TC1-220ENST00000511002 KCNK12Q9HB15 430 aa16.65■□□□□ 0.26
SH3TC1-220ENST00000511002 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
SH3TC1-220ENST00000511002 EPS15L1Q9UBC2 864 aa16.65■□□□□ 0.26
SH3TC1-220ENST00000511002 AFF4Q9UHB7 1163 aaKnown RBP16.65■□□□□ 0.26
SH3TC1-220ENST00000511002 SNX9Q9Y5X1 595 aa16.65■□□□□ 0.26
SH3TC1-220ENST00000511002 SMTNL1A8MU46 457 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 NARSO43776 548 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 XYLBO75191 536 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 STAU1O95793 577 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 ASS1P00966 412 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 CYP11A1P05108 521 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 POU2F2P09086 479 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 LAMP2P13473 410 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 ATP1A3P13637 1013 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 PRKCSHP14314 528 aaPredicted RBP16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 PAX3P23760 479 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 ATICP31939 592 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 ELF1P32519 619 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 KRT31Q15323 416 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 MIIPQ5JXC2 388 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 WSCD1Q658N2 575 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 TPGS2Q68CL5 300 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 TCEAL8Q8IYN2 117 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 FBXL13Q8NEE6 735 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 FAM200AQ8TCP9 573 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 TUBGCP2Q9BSJ2 902 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 RPP25Q9BUL9 199 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 APOBEC3GQ9HC16 384 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 GDAP2Q9NXN4 497 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 CEP72Q9P209 647 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 NXF1Q9UBU9 619 aaKnown RBP16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 L1RE1Q9UN81 338 aa16.64■□□□□ 0.25
SH3TC1-220ENST00000511002 ZDBF2Q9HCK1 2354 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 BECN2A8MW95 431 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 SOAT2O75908 522 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 CAVIN2O95810 425 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 LRG1P02750 347 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 RHOP08100 348 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 NOP14P78316 857 aaKnown RBP16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 MTMR3Q13615 1198 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 SGSM1Q2NKQ1 1148 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 PABPC1LQ4VXU2 614 aaKnown RBP16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 SCARA5Q6ZMJ2 495 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 HS6ST3Q8IZP7 471 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 PDCL2Q8N4E4 241 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 ATAD1Q8NBU5 361 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 FGF13Q92913 245 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 TCEAL4Q96EI5 215 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 SMYD3Q9H7B4 428 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 VRTNQ9H8Y1 702 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 RAB20Q9NX57 234 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 YIPF1Q9Y548 306 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 KMT2EQ8IZD2 1858 aa16.63■□□□□ 0.25
SH3TC1-220ENST00000511002 MTMR11A4FU01 709 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 OR6C75A6NL08 312 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 PMM2O15305 246 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 HCRTO43612 131 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 HUS1O60921 280 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 CCR2P41597 374 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 TNNC1P63316 161 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 TWF1Q12792 350 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 DUSP4Q13115 394 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 HTR4Q13639 388 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 CCDC142Q17RM4 750 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 SOWAHAQ2M3V2 549 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 VWA3BQ502W6 1294 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 ZNF667Q5HYK9 610 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 BMP8AQ7Z5Y6 402 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 LRRTM3Q86VH5 581 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 NPAS3Q8IXF0 933 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 TOP6BLQ8N6T0 577 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 TAF4BQ92750 862 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 PBXIP1Q96AQ6 731 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 IMPG2Q9BZV3 1241 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 VPS16Q9H269 839 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 NDST4Q9H3R1 872 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.62■□□□□ 0.254e-18■■■■■ 44
SH3TC1-220ENST00000511002 LIMA1Q9UHB6 759 aaKnown RBP16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 CDH7Q9ULB5 785 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 SLC27A5Q9Y2P5 690 aa16.62■□□□□ 0.25
SH3TC1-220ENST00000511002 ANHXE9PGG2 379 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 P4HA2O15460 535 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 CEBPBP17676 345 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 ASPAP45381 313 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 VCPP55072 806 aaKnown RBP16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 LRMPQ12912 555 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 GPR17Q13304 367 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 TDGQ13569 410 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 PARM1Q6UWI2 310 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 RTL10Q7L3V2 364 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 APTXQ7Z2E3 356 aaKnown RBP16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 LIMS2Q7Z4I7 341 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 OSTM1Q86WC4 334 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 ADGRF2Q8IZF7 708 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 SLC44A3Q8N4M1 653 aa16.61■□□□□ 0.25
SH3TC1-220ENST00000511002 LMO3Q8TAP4 145 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms