RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, human

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX4-208	ENST00000508580	KRT72	Q14CN4	511 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	CCDC89	Q8N998	374 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	PDPR	Q8NCN5	879 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	VPS37A	Q8NEZ2	397 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	TFAP2B	Q92481	460 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	NELL1	Q92832	810 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	GJA10	Q969M2	543 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	TTC17	Q96AE7	1141 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	FBXL20	Q96IG2	436 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	ASB6	Q9NWX5	421 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	CALCOCO1	Q9P1Z2	691 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	SLC17A6	Q9P2U8	582 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.58	□□□□□ -1.68
DDX4-208	ENST00000508580	MRFAP1	Q9Y605	127 aa		4.58	□□□□□ -1.68
DDX4-208	ENST00000508580		E9PLN8	166 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	F2RL2	O00254	374 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	MPPED1	O15442	326 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	PROM1	O43490	865 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	CD1A	P06126	327 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	MAL	P21145	153 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	LPO	P22079	712 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	MC2R	Q01718	297 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	CHAF1A	Q13111	956 aa	Predicted RBP	4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	PTPN21	Q16825	1174 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	SLC4A8	Q2Y0W8	1093 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	ZKSCAN2	Q63HK3	967 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	GADL1	Q6ZQY3	521 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	ZNF365	Q70YC5	407 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	TMPRSS9	Q7Z410	1059 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	TOR1AIP2	Q8NFQ8	470 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	VKORC1	Q9BQB6	163 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	PACSIN1	Q9BY11	444 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	MAN1C1	Q9NR34	630 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	ANKRD6	Q9Y2G4	727 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	SCRIB	Q14160	1630 aa		4.57	□□□□□ -1.68
DDX4-208	ENST00000508580	LRRC14B	A6NHZ5	514 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	VWC2L	B2RUY7	222 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	ADM5	C9JUS6	153 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	ERC2	O15083	957 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	ANP32C	O43423	234 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	NBN	O60934	754 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	RNASEH2A	O75792	299 aa	Known RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	SNUPN	O95149	360 aa	Known RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	CCND1	P24385	295 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	LMO1	P25800	156 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	CYP2C19	P33261	490 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	ANXA11	P50995	505 aa	Known RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	MAPK10	P53779	464 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	GEMIN4	P57678	1058 aa	Known RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	NHLH1	Q02575	133 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	GTF2H3	Q13889	308 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	GRM3	Q14832	879 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	UAP1L1	Q3KQV9	507 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	AKNAD1	Q5T1N1	836 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	PPP4R3A	Q6IN85	833 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	C1orf228	Q6PIY5	440 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	SLC30A10	Q6XR72	485 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	MMS22L	Q6ZRQ5	1243 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	PNMA8A	Q86V59	439 aa	Predicted RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	ADGRG5	Q8IZF4	528 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	PPHLN1	Q8NEY8	458 aa	Known RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	NSUN6	Q8TEA1	469 aa	Known RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	SNRNP27	Q8WVK2	155 aa	Known RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	MPP4	Q96JB8	637 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	NLRC4	Q9NPP4	1024 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	MRPS18A	Q9NVS2	196 aa	Known RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	FBXO2	Q9UK22	296 aa	Predicted RBP	4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	PHTF1	Q9UMS5	762 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	FAM50B	Q9Y247	325 aa		4.56	□□□□□ -1.68
DDX4-208	ENST00000508580	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	CCDC195	A0A1B0GUA6	201 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	DYTN	A2CJ06	578 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	NT5C1B-RDH14	C9J2C7	533 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	RBMXL2	O75526	392 aa	Known RBP	4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	C1R	P00736	705 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	PF4V1	P10720	104 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	DDIT3	P35638	169 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	GRIA3	P42263	894 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	PHKA1	P46020	1223 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	KRT85	P78386	507 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	POU6F2	P78424	691 aa	Predicted RBP	4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	STK3	Q13188	491 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	BIRC3	Q13489	604 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	PTPRR	Q15256	657 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	PUM3	Q15397	648 aa	Known RBP	4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	ARHGAP29	Q52LW3	1261 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	HYI	Q5T013	277 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	MICALCL	Q6ZW33	695 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	PEG10	Q86TG7	708 aa	Known RBP	4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	TTC7B	Q86TV6	843 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	CPA6	Q8N4T0	437 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	POC1B	Q8TC44	478 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	SKA1	Q96BD8	255 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	PGBD1	Q96JS3	809 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	TNIP3	Q96KP6	325 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	TRIB1	Q96RU8	372 aa		4.55	□□□□□ -1.68
DDX4-208	ENST00000508580	TIMP4	Q99727	224 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms