RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, humanhuman

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-208ENST00000508580 AEBP2Q6ZN18 517 aaPredicted RBP22.99■■□□□ 1.27
DDX4-208ENST00000508580 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
DDX4-208ENST00000508580 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
DDX4-208ENST00000508580 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
DDX4-208ENST00000508580 FOXD1Q16676 465 aa18.17■□□□□ 0.5
DDX4-208ENST00000508580 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
DDX4-208ENST00000508580 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
DDX4-208ENST00000508580 ADRA2BP18089 450 aa17.25■□□□□ 0.35
DDX4-208ENST00000508580 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
DDX4-208ENST00000508580 MSH5O43196 834 aa16.78■□□□□ 0.28
DDX4-208ENST00000508580 POTEDQ86YR6 584 aa15.91■□□□□ 0.14
DDX4-208ENST00000508580 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
DDX4-208ENST00000508580 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
DDX4-208ENST00000508580 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
DDX4-208ENST00000508580 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
DDX4-208ENST00000508580 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
DDX4-208ENST00000508580 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
DDX4-208ENST00000508580 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
DDX4-208ENST00000508580 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
DDX4-208ENST00000508580 KCNA4P22459 653 aa14.95□□□□□ -0.02
DDX4-208ENST00000508580 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
DDX4-208ENST00000508580 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
DDX4-208ENST00000508580 DNAJC5BQ9UF47 199 aa14.47□□□□□ -0.09
DDX4-208ENST00000508580 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
DDX4-208ENST00000508580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDX4-208ENST00000508580 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
DDX4-208ENST00000508580 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
DDX4-208ENST00000508580 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
DDX4-208ENST00000508580 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
DDX4-208ENST00000508580 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
DDX4-208ENST00000508580 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
DDX4-208ENST00000508580 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
DDX4-208ENST00000508580 ZBTB22O15209 634 aa13.77□□□□□ -0.21
DDX4-208ENST00000508580 CAPN15O75808 1086 aa13.75□□□□□ -0.21
DDX4-208ENST00000508580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
DDX4-208ENST00000508580 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
DDX4-208ENST00000508580 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
DDX4-208ENST00000508580 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
DDX4-208ENST00000508580 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
DDX4-208ENST00000508580 DSG3P32926 999 aa13.62□□□□□ -0.23
DDX4-208ENST00000508580 APLP2Q06481 763 aa13.62□□□□□ -0.23
DDX4-208ENST00000508580 ZNF219Q9P2Y4 722 aaPredicted RBP13.53□□□□□ -0.24
DDX4-208ENST00000508580 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
DDX4-208ENST00000508580 ABCB7O75027 752 aa13.48□□□□□ -0.25
DDX4-208ENST00000508580 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
DDX4-208ENST00000508580 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
DDX4-208ENST00000508580 POLA2Q14181 598 aa13.36□□□□□ -0.27
DDX4-208ENST00000508580 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
DDX4-208ENST00000508580 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
DDX4-208ENST00000508580 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
DDX4-208ENST00000508580 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
DDX4-208ENST00000508580 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
DDX4-208ENST00000508580 FBLN2P98095 1184 aa12.84□□□□□ -0.35
DDX4-208ENST00000508580 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
DDX4-208ENST00000508580 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
DDX4-208ENST00000508580 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
DDX4-208ENST00000508580 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
DDX4-208ENST00000508580 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
DDX4-208ENST00000508580 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
DDX4-208ENST00000508580 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
DDX4-208ENST00000508580 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
DDX4-208ENST00000508580 POTEHQ6S545 545 aa12.52□□□□□ -0.41
DDX4-208ENST00000508580 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
DDX4-208ENST00000508580 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDX4-208ENST00000508580 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
DDX4-208ENST00000508580 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
DDX4-208ENST00000508580 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
DDX4-208ENST00000508580 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
DDX4-208ENST00000508580 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
DDX4-208ENST00000508580 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
DDX4-208ENST00000508580 PRKAR2AP13861 404 aaKnown RBP12.16□□□□□ -0.46
DDX4-208ENST00000508580 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
DDX4-208ENST00000508580 PROM2Q8N271 834 aa12.13□□□□□ -0.47
DDX4-208ENST00000508580 FKBP8Q14318 412 aa12.12□□□□□ -0.47
DDX4-208ENST00000508580 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
DDX4-208ENST00000508580 HAX1O00165 279 aa12.04□□□□□ -0.48
DDX4-208ENST00000508580 CREBZFQ9NS37 354 aa12□□□□□ -0.49
DDX4-208ENST00000508580 EVX2Q03828 476 aa11.99□□□□□ -0.49
DDX4-208ENST00000508580 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
DDX4-208ENST00000508580 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
DDX4-208ENST00000508580 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
DDX4-208ENST00000508580 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
DDX4-208ENST00000508580 MIER1Q8N108 512 aa11.83□□□□□ -0.52
DDX4-208ENST00000508580 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
DDX4-208ENST00000508580 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX4-208ENST00000508580 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
DDX4-208ENST00000508580 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
DDX4-208ENST00000508580 GABBR2O75899 941 aa11.68□□□□□ -0.54
DDX4-208ENST00000508580 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
DDX4-208ENST00000508580 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
DDX4-208ENST00000508580 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
DDX4-208ENST00000508580 TSPYL2Q9H2G4 693 aaPredicted RBP11.59□□□□□ -0.55
DDX4-208ENST00000508580 PAK3O75914 559 aaPredicted RBP11.58□□□□□ -0.56
DDX4-208ENST00000508580 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
DDX4-208ENST00000508580 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
DDX4-208ENST00000508580 PHF12Q96QT6 1004 aa11.56□□□□□ -0.56
DDX4-208ENST00000508580 NUBP1P53384 320 aa11.55□□□□□ -0.56
DDX4-208ENST00000508580 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
DDX4-208ENST00000508580 CLCN6P51797 869 aa11.5□□□□□ -0.57
DDX4-208ENST00000508580 KLHL34Q8N239 644 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms