RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 FUBP3Q96I24 572 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 FAXDC2Q96IV6 333 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 ZNF512Q96ME7 567 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 SEPT5Q99719 369 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 SDCBP2Q9H190 292 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 DNAJC25Q9H1X3 360 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 CRTAC1Q9NQ79 661 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 RAB20Q9NX57 234 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 ASB3Q9Y575 518 aa19.48■□□□□ 0.71
PDLIM7-209ENST00000503346 MUC3AQ02505 3323 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 A8MXQ7 604 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 ATP2C2O75185 946 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 RAP1GAPP47736 663 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 EPHA5P54756 1037 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 CDH8P55286 799 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 PSMC1P62191 440 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 CCDC142Q17RM4 750 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 CFAP221Q4G0U5 840 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 CCDC183Q5T5S1 534 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 SCARA5Q6ZMJ2 495 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 GET4Q7L5D6 327 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 MYADMQ96S97 322 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 BCO2Q9BYV7 579 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 NIF3L1Q9GZT8 377 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 EPS15L1Q9UBC2 864 aa19.47■□□□□ 0.71
PDLIM7-209ENST00000503346 DENND4AQ7Z401 1863 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 LRRN2O75325 713 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 SOAT2O75908 522 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 CCDC192P0DO97 292 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 GBP2P32456 591 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 FMO5P49326 533 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 CDR1P51861 262 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 C4orf50Q6ZRC1 276 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 LEMD2Q8NC56 503 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 ITFG1Q8TB96 612 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 MYCBPAPQ8TBZ2 947 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 KHSRPQ92945 711 aaKnown RBP eCLIP19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 PSMG2Q969U7 264 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 CORO1BQ9BR76 489 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 CYP3A43Q9HB55 503 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.46■□□□□ 0.716e-7■■■■■ 67.2
PDLIM7-209ENST00000503346 CDH7Q9ULB5 785 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 ZFP37Q9Y6Q3 630 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 C2orf16Q68DN1 1984 aa19.46■□□□□ 0.71
PDLIM7-209ENST00000503346 ZNF197O14709 1029 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 P4HA2O15460 535 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 MICAL2O94851 1124 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 PTPN1P18031 435 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 ATF6P18850 670 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 MAGEA11P43364 429 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 SLC5A9Q2M3M2 681 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 PRSS36Q5K4E3 855 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 CYP4A22Q5TCH4 519 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 PDZD4Q76G19 769 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 ITIH5Q86UX2 942 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 UNC93AQ86WB7 457 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 SPATA2LQ8IUW3 424 aaPredicted RBP19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 HS6ST3Q8IZP7 471 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 B3GALNT2Q8NCR0 500 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 MYLPFQ96A32 169 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 LRRC3Q9BY71 257 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 DPEP3Q9H4B8 488 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 ASAH2Q9NR71 780 aa19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 MRPS23Q9Y3D9 190 aaKnown RBP19.45■□□□□ 0.7
PDLIM7-209ENST00000503346 LAMP2P13473 410 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 CYP2F1P24903 491 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 INCA1Q0VD86 236 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 VEPH1Q14D04 833 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 MDH1BQ5I0G3 518 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 WDR44Q5JSH3 913 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 DNAJB7Q7Z6W7 309 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 TMC8Q8IU68 726 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 IRF2BP1Q8IU81 584 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 FGF13Q92913 245 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 PCED1BQ96HM7 432 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 TNIP3Q96KP6 325 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 MAGEC2Q9UBF1 373 aaPredicted RBP19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 MUTYHQ9UIF7 546 aa19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDLIM7-209ENST00000503346 PI4K2BG5E9Z4 385 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 DCXO43602 365 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 CCR2P41597 374 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 NDST1P52848 882 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 RPL10AP62906 217 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 KCNH2Q12809 1159 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 VSTM1Q6UX27 236 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 NPAS3Q8IXF0 933 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 CRYBG2Q8N1P7 616 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 CNOT6LQ96LI5 555 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 LPIN3Q9BQK8 851 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 THAP9Q9H5L6 903 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 FAM124BQ9H5Z6 455 aaPredicted RBP19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 TMEM63CQ9P1W3 806 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 LIMD1Q9UGP4 676 aa19.43■□□□□ 0.7
PDLIM7-209ENST00000503346 NCOR1O75376 2440 aa19.42■□□□□ 0.7
PDLIM7-209ENST00000503346 MOSPD3O75425 235 aa19.42■□□□□ 0.7
PDLIM7-209ENST00000503346 AFPP02771 609 aaKnown RBP19.42■□□□□ 0.7
PDLIM7-209ENST00000503346 ALADP13716 330 aa19.42■□□□□ 0.7
PDLIM7-209ENST00000503346 GPR15P49685 360 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms