RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 MAPK13O15264 365 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 TP73O15350 636 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 GPR39O43194 453 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 DAPK3O43293 454 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 BRINP1O60477 761 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 EFCAB14O75071 495 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 FLOT1O75955 427 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 AKAP3O75969 853 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 C6orf222P0C671 652 aaPredicted RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 CCDC172P0C7W6 258 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ACTN1P12814 892 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 GAP43P17677 238 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 RPS12P25398 132 aaKnown RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 MAP2K2P36507 400 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 GRIA2P42262 883 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CASP5P51878 434 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 GALCP54803 685 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 SLC8A3P57103 927 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ENPEPQ07075 957 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 IFT88Q13099 833 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 NEDD9Q14511 834 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 EXOC3L4Q17RC7 722 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 GPATCH4Q5T3I0 446 aaKnown RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 PKN3Q6P5Z2 889 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 RHBDF2Q6PJF5 856 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 B3GNT9Q6UX72 402 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CCDC121Q6ZUS5 278 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ZNF804AQ7Z570 1209 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ADAT2Q7Z6V5 191 aaKnown RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 CATSPER3Q86XQ3 398 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 C12orf56Q8IXR9 622 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 ZNF513Q8N8E2 541 aaPredicted RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 BVESQ8NE79 360 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 RFFLQ8WZ73 363 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CUL5Q93034 780 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 COA7Q96BR5 231 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 EEF2KMTQ96G04 330 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 KLHDC7BQ96G42 594 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CDK5RAP3Q96JB5 506 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 FGD4Q96M96 766 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 FAM20AQ96MK3 541 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 RAB17Q9H0T7 212 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 CPVLQ9H3G5 476 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 NDOR1Q9UHB4 597 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 AMFRQ9UKV5 643 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 VAV3Q9UKW4 847 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 SYNPO2Q9UMS6 1093 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 PCDHA12Q9UN75 941 aa4.19□□□□□ -1.74
CLTC-209ENST00000498711 PACSIN2Q9UNF0 486 aaPredicted RBP4.19□□□□□ -1.74
CLTC-209ENST00000498711 NPHP3-ACAD11A0A0J9YXS1 232 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 GOLGA6L7A0A1B0GV03 622 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 FZD9O00144 591 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 MEIS2O14770 477 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 P4HA2O15460 535 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CEP104O60308 925 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 WFS1O76024 890 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 ASLP04424 464 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CAPNS1P04632 268 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 TMOD1P28289 359 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CTNNA1P35221 906 aaKnown RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 STAT1P42224 750 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 MAP2K3P46734 347 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 RAB27AP51159 221 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 AFF1P51825 1210 aaKnown RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 GABREP78334 506 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CCDC15Q0P6D6 951 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 RAPGEF1Q13905 1077 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CRYMQ14894 314 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 SLMAPQ14BN4 828 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 SNCBQ16143 134 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 TDRD12Q587J7 1177 aaKnown RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 ASRGL1Q7L266 308 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 APBB1IPQ7Z5R6 666 aaPredicted RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 PNMA8AQ86V59 439 aaPredicted RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 GPBP1Q86WP2 473 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 LDHDQ86WU2 507 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 NBPF5PQ86XG9 351 aaPredicted RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 WFDC8Q8IUA0 241 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 MAPKAPK5Q8IW41 473 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 KLHL7Q8IXQ5 586 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 SP8Q8IXZ3 490 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 ZDHHC14Q8IZN3 488 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CACNA2D3Q8IZS8 1091 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 MYO1HQ8N1T3 1032 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 GSTCDQ8NEC7 633 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 OR2W6PQ8NHA6 318 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CCHCR1Q8TD31 782 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 DCAF4Q8WV16 495 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 PSMB7Q99436 277 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 P2RX7Q99572 595 aaKnown RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 DPH2Q9BQC3 489 aaPredicted RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 JPH2Q9BR39 696 aaPredicted RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 UBA5Q9GZZ9 404 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 DEFB129Q9H1M3 183 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 CD248Q9HCU0 757 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 ZIM2Q9NZV7 527 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 ARMCX3Q9UH62 379 aaPredicted RBP4.18□□□□□ -1.74
CLTC-209ENST00000498711 PPP1R9AQ9ULJ8 1098 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 NR2E1Q9Y466 385 aa4.18□□□□□ -1.74
CLTC-209ENST00000498711 TNPO3Q9Y5L0 923 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms