RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 F11P03951 625 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 HMGA1P17096 107 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 ADSSP30520 456 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 SOX9P48436 509 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 MYL7Q01449 175 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 RUNX3Q13761 415 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 TMEM196Q5HYL7 178 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 RRAGBQ5VZM2 374 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 CEP68Q76N32 757 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 DPH6Q7L8W6 267 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 TMEM130Q8N3G9 435 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 CAMKK1Q8N5S9 505 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 TRMT2BQ96GJ1 504 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 FUBP3Q96I24 572 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 MYRFLQ96LU7 910 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 RBM12Q9NTZ6 932 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 GDAP2Q9NXN4 497 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 ITGA11Q9UKX5 1188 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 SPAG17Q6Q759 2223 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 PFKLP17858 780 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 DRD1P21728 446 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 PCSK1P29120 753 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 LHX1P48742 406 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 CYP4F8P98187 520 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 CCDC73Q6ZRK6 1079 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 PRR23CQ6ZRP0 262 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 SFR1Q86XK3 245 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 BRSK2Q8IWQ3 736 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 EFCAB13Q8IY85 973 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 KIAA1958Q8N8K9 716 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 ZFYVE19Q96K21 471 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 TMEM206Q9H813 350 aa18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 R3HCC1Q9Y3T6 440 aaKnown RBP18.12■□□□□ 0.49
TRAPPC3-207ENST00000497251 RALGAPA1Q6GYQ0 2036 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 PRPF40AO75400 957 aaKnown RBP18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 PDE6CP51160 858 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 LIMK1P53667 647 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 RBP5P82980 135 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 TFAMQ00059 246 aaKnown RBP18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 GRIN1Q05586 938 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 TNK2Q07912 1038 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 SURF1Q15526 300 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 CFAP221Q4G0U5 840 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 Q6ZS52 159 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 DYMQ7RTS9 669 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 CACNA2D4Q7Z3S7 1137 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 TMEM150AQ86TG1 271 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 TOP6BLQ8N6T0 577 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 MAB21L3Q8N8X9 362 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 FSIP1Q8NA03 581 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 GIPC2Q8TF65 315 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 EPSTI1Q96J88 318 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 SLC8A2Q9UPR5 921 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 PCDHGA5Q9Y5G8 931 aa18.11■□□□□ 0.49
TRAPPC3-207ENST00000497251 ANK1P16157 1881 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 EXTL3O43909 919 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 NOL4O94818 638 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 MYO1EQ12965 1108 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 MAPRE1Q15691 268 aaKnown RBP18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 LPAL2Q16609 132 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 WDR44Q5JSH3 913 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 INTS6LQ5JSJ4 861 aaKnown RBP18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 STXBP4Q6ZWJ1 553 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 SYCP3Q8IZU3 236 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 PDCL2Q8N4E4 241 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 FAM160A2Q8N612 972 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 GAB3Q8WWW8 586 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 DNAJC19Q96DA6 116 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 FAM213AQ9BRX8 229 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 LRRC27Q9C0I9 530 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 EHD2Q9NZN4 543 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 AGAP1Q9UPQ3 857 aa18.1■□□□□ 0.49
TRAPPC3-207ENST00000497251 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 FRMD3A2A2Y4 597 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 DCDC2BA2VCK2 349 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 TISP43B9A030 160 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 GABRDO14764 452 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 GCNT3O95395 438 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 ADRB1P08588 477 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 POLR2BP30876 1174 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 MAGEA11P43364 429 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 FAM160A1Q05DH4 1040 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 NR1H3Q13133 447 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 CUL4AQ13619 759 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 HEATR6Q6AI08 1181 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 GPIHBP1Q8IV16 184 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 CPA6Q8N4T0 437 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 CSGALNACT2Q8N6G5 542 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 C1orf127Q8N9H9 656 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 HPS4Q9NQG7 708 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 DDX43Q9NXZ2 648 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 RBAKQ9NYW8 714 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 FBXO2Q9UK22 296 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 TSC2P49815 1807 aa18.09■□□□□ 0.49
TRAPPC3-207ENST00000497251 MYMKA6NI61 221 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 RPP40O75818 363 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms