RNA–Protein interactions for RNA: ENST00000496055.5

RABGGTB-213, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 3,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-213ENST00000496055 SYCE3A1L190 88 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 GSG1L2A8MUP6 293 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 A8MX80 341 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 H3BUI4 141 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SULT1B1O43704 296 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SNAI1O95863 264 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 L1CAMP32004 1257 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SSTR3P32745 418 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SERPINB6P35237 376 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SOX11P35716 441 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 TXLNAP40222 546 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 RAD52P43351 418 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CCR3P51677 355 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 BEX3Q00994 111 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 DEPDC1Q5TB30 811 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 NFRKBQ6P4R8 1299 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 VASH1Q7L8A9 365 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 DEFB128Q7Z7B8 93 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 RALYLQ86SE5 291 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 GALNT13Q8IUC8 556 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 TTC8Q8TAM2 541 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 IFT81Q8WYA0 676 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 NSMCE3Q96MG7 304 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 ASB2Q96Q27 587 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 PIP5K1AQ99755 562 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 TMEM206Q9H813 350 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 EBF2Q9HAK2 575 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 NCOA5Q9HCD5 579 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 ALG13Q9NP73 1137 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 ANKEF1Q9NU02 776 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 BLOC1S4Q9NUP1 217 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 GMIPQ9P107 970 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CRNNQ9UBG3 495 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 VANGL2Q9ULK5 521 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 DUSP12Q9UNI6 340 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 MTF2Q9Y483 593 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 PCDHB4Q9Y5E5 795 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 EMSYQ7Z589 1322 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CAPN14A8MX76 684 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CDC45O75419 566 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 MT-ND3P03897 115 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 LTA4HP09960 611 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CYP2C9P11712 490 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 TAL1P17542 331 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 IL10P22301 178 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CSTF2P33240 577 aaKnown RBP eCLIP4.82□□□□□ -1.646e-18■■■■■ 26.9
RABGGTB-213ENST00000496055 SOX5P35711 763 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CLCN4P51793 760 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 PPP2R2AP63151 447 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 RPP38P78345 283 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 KRT85P78386 507 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 BAATQ14032 418 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 HLTFQ14527 1009 aaKnown RBP eCLIP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 GRIN2CQ14957 1233 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 DGKDQ16760 1214 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 MCMDC2Q4G0Z9 681 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 ASPRV1Q53RT3 343 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 LIN54Q6MZP7 749 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SARM1Q6SZW1 724 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 KCTD1Q719H9 257 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SCUBE1Q8IWY4 988 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 NATD1Q8N6N6 113 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 FAM133AQ8N9E0 248 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 HLA-CQ95604 372 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 RILPL2Q969X0 211 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 TTC1Q99614 292 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 C19orf43Q9BQ61 176 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 GHITMQ9H3K2 345 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 DCTPP1Q9H773 170 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 WDR6Q9NNW5 1121 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CNGB3Q9NQW8 809 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 TRPM5Q9NZQ8 1165 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CXXC1Q9P0U4 656 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SH3BGRL2Q9UJC5 107 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CHMP2BQ9UQN3 213 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 USP20Q9Y2K6 914 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 PCDHGA2Q9Y5H1 932 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SNX8Q9Y5X2 465 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 WDR19Q8NEZ3 1342 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 DNAJC25-GNG10A0A024R161 153 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 INO80B-WBP1J3KQ70 363 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 M0QZ92 97 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SCAMP3O14828 347 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 MAPK13O15264 365 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 PYGMP11217 842 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 AXLP30530 894 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CCT5P48643 541 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 PTPN5P54829 565 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 MAP3K7CLP57077 242 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SMARCB1Q12824 385 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 TRAP1Q12931 704 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 KRT32Q14532 448 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 STILQ15468 1287 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 NDUFA5Q16718 116 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 TIGD5Q53EQ6 642 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 RNASEH2BQ5TBB1 312 aaKnown RBP4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 C3orf62Q6ZUJ4 267 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 SPATA24Q86W54 205 aa4.82□□□□□ -1.64
RABGGTB-213ENST00000496055 CD302Q8IX05 232 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms