RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 MCTP2Q6DN12 878 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 USP17L6PQ6QN14 398 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 KIAA0408Q6ZU52 694 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 C1QL4Q86Z23 238 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 CCDC28AQ8IWP9 274 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 LRRC56Q8IYG6 542 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-207ENST00000494412 PDILTQ8N807 584 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 SIMC1Q8NDZ2 872 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 DNERQ8NFT8 737 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 TBC1D15Q8TC07 691 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 SPPL3Q8TCT6 385 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 OTUD7AQ8TE49 926 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-207ENST00000494412 SMCR8Q8TEV9 937 aaPredicted RBP4.85□□□□□ -1.63
CMSS1-207ENST00000494412 ZNF384Q8TF68 577 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 NELL2Q99435 816 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 CPEB1Q9BZB8 566 aaKnown RBP4.85□□□□□ -1.63
CMSS1-207ENST00000494412 SIK2Q9H0K1 926 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 DHX36Q9H2U1 1008 aaKnown RBP4.85□□□□□ -1.63
CMSS1-207ENST00000494412 UBN1Q9NPG3 1134 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 ZSCAN32Q9NX65 697 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 NRBP1Q9UHY1 535 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 FEM1BQ9UK73 627 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 MTO1Q9Y2Z2 717 aaKnown RBP4.85□□□□□ -1.63
CMSS1-207ENST00000494412 IRAK3Q9Y616 596 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 HS3ST4Q9Y661 456 aa4.85□□□□□ -1.63
CMSS1-207ENST00000494412 PNPLA7Q6ZV29 1317 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 KCNQ3O43525 872 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 NUAK1O60285 661 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 VPS4BO75351 444 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 SOAT2O75908 522 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 STC2O76061 302 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 ACTL6BO94805 426 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 CHEK2O96017 543 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 XRCC6P12956 609 aaKnown RBP eCLIP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 PECAM1P16284 738 aaPredicted RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 ATICP31939 592 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 PTTG1IPP53801 180 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 EIF5P55010 431 aaKnown RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 POLE2P56282 527 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 JAG1P78504 1218 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 FSTL1Q12841 308 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 CUL4BQ13620 913 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 KCTD2Q14681 263 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 KCNAB1Q14722 419 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 ZNF568Q3ZCX4 644 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 PLA1AQ53H76 456 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 FAXCQ5TGI0 409 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 PLAG1Q6DJT9 500 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 RALYLQ86SE5 291 aaKnown RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 ADGRE4PQ86SQ3 457 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 TBC1D1Q86TI0 1168 aaPredicted RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 XYLT1Q86Y38 959 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 KLHL36Q8N4N3 616 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 FITM2Q8N6M3 262 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 OR1N1Q8NGS0 311 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 AFG1LQ8WV93 481 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 HDAC2Q92769 488 aaKnown RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 MAELQ96JY0 434 aaKnown RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 KLHL32Q96NJ5 620 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 TTYH3Q9C0H2 523 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 SEPSECSQ9HD40 501 aaKnown RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 RASSF1Q9NS23 344 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 MRPS18AQ9NVS2 196 aaKnown RBP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 NTMQ9P121 344 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 BCCIPQ9P287 314 aaKnown RBP eCLIP4.84□□□□□ -1.63
CMSS1-207ENST00000494412 HESX1Q9UBX0 185 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 ADAM29Q9UKF5 820 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 SLC13A4Q9UKG4 626 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 NR2E1Q9Y466 385 aa4.84□□□□□ -1.63
CMSS1-207ENST00000494412 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 UBE2QL1A1L167 161 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 E9PLN8 166 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 TIMM44O43615 452 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 ITGB1P05556 798 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 CKBP12277 381 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 ATP1A3P13637 1013 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 JUPP14923 745 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 CAPN3P20807 821 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 SLC6A2P23975 617 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 CST5P28325 142 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-207ENST00000494412 LIFRP42702 1097 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 PTDSS1P48651 473 aaKnown RBP4.83□□□□□ -1.64
CMSS1-207ENST00000494412 TUBP50607 506 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 PRKAA2P54646 552 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 WNT3P56703 355 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 AP2B1P63010 937 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 UBXN2BQ14CS0 331 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 TOMM20Q15388 145 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 INSCQ1MX18 579 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 RNF151Q2KHN1 245 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 VMACQ2NL98 169 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 ATXN7L2Q5T6C5 722 aaPredicted RBP4.83□□□□□ -1.64
CMSS1-207ENST00000494412 CACHD1Q5VU97 1274 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 FCRL6Q6DN72 434 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 KRT73Q86Y46 540 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 CPOQ8IVL8 374 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 CCDC89Q8N998 374 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 PDPRQ8NCN5 879 aa4.83□□□□□ -1.64
CMSS1-207ENST00000494412 UBE2Q2Q8WVN8 375 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms