RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 YIPF1Q9Y548 306 aa10.8□□□□□ -0.68
RFC2-211ENST00000494019 PCDHB5Q9Y5E4 795 aa10.8□□□□□ -0.68
RFC2-211ENST00000494019 HELZP42694 1942 aaKnown RBP10.8□□□□□ -0.68
RFC2-211ENST00000494019 C5orf42Q9H799 3197 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 MYBPHLA2RUH7 354 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 TPM2P07951 284 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 HNRNPA1P09651 372 aaKnown RBP eCLIP10.79□□□□□ -0.68
RFC2-211ENST00000494019 FAM163BP0C2L3 166 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 HOXA9P31269 272 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 NDST1P52848 882 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 CYP27A1Q02318 531 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 TWF1Q12792 350 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 SMARCB1Q12824 385 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 DUSP4Q13115 394 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 ORC1Q13415 861 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 CBX2Q14781 532 aaPredicted RBP10.79□□□□□ -0.68
RFC2-211ENST00000494019 NCAPHQ15003 741 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 NFE2Q16621 373 aaPredicted RBP10.79□□□□□ -0.68
RFC2-211ENST00000494019 UVSSAQ2YD98 709 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 MGAT5BQ3V5L5 792 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 VWA3BQ502W6 1294 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 MDH1BQ5I0G3 518 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 MIIPQ5JXC2 388 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 GPR149Q86SP6 731 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 SPATA2LQ8IUW3 424 aaPredicted RBP10.79□□□□□ -0.68
RFC2-211ENST00000494019 PPM1KQ8N3J5 372 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 B3GALNT2Q8NCR0 500 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 ANKRD20A12PQ8NF67 263 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 CMASQ8NFW8 434 aaPredicted RBP10.79□□□□□ -0.68
RFC2-211ENST00000494019 C2orf15Q8WU43 125 aaKnown RBP10.79□□□□□ -0.68
RFC2-211ENST00000494019 TATDN2Q93075 761 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 ZNF707Q96C28 371 aaPredicted RBP10.79□□□□□ -0.68
RFC2-211ENST00000494019 TNIP3Q96KP6 325 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 RIPOR3Q96MK2 946 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 PKMYT1Q99640 499 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 PRKD2Q9BZL6 878 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 INTS2Q9H0H0 1204 aaKnown RBP10.79□□□□□ -0.68
RFC2-211ENST00000494019 CRISPLD1Q9H336 500 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 NDST4Q9H3R1 872 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 CYP3A43Q9HB55 503 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 CRTAC1Q9NQ79 661 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 MAFFQ9ULX9 164 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 SLC27A5Q9Y2P5 690 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 UNC80Q8N2C7 3258 aa10.79□□□□□ -0.68
RFC2-211ENST00000494019 BECN2A8MW95 431 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 XYLBO75191 536 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 SOAT2O75908 522 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 TRIM21P19474 475 aaKnown RBP10.78□□□□□ -0.68
RFC2-211ENST00000494019 TBXAS1P24557 533 aaPredicted RBP10.78□□□□□ -0.68
RFC2-211ENST00000494019 MTHFRP42898 656 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 INCA1Q0VD86 236 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 PLD1Q13393 1074 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 CUL2Q13617 745 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 KRT31Q15323 416 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 MAPRE1Q15691 268 aaKnown RBP10.78□□□□□ -0.68
RFC2-211ENST00000494019 SMAD2Q15796 467 aaKnown RBP10.78□□□□□ -0.68
RFC2-211ENST00000494019 ZNF394Q53GI3 561 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 TJAP1Q5JTD0 557 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 ATAT1Q5SQI0 421 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 FAM171BQ6P995 826 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 TRIM65Q6PJ69 517 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 GBP6Q6ZN66 633 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 C4orf50Q6ZRC1 276 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 RTL10Q7L3V2 364 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 ACOT1Q86TX2 421 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 UNC93AQ86WB7 457 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 DHX40Q8IX18 779 aaKnown RBP10.78□□□□□ -0.68
RFC2-211ENST00000494019 ELMOD1Q8N336 334 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 LMO3Q8TAP4 145 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 SUSD6Q92537 303 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 PCED1BQ96HM7 432 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 FAXDC2Q96IV6 333 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 NECTIN4Q96NY8 510 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 TWNKQ96RR1 684 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 LPIN3Q9BQK8 851 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 CRACR2AQ9BSW2 395 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 RHOBTB2Q9BYZ6 727 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 POMKQ9H5K3 350 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 HSFX1Q9UBD0 423 aa10.78□□□□□ -0.68
RFC2-211ENST00000494019 GTPBP10A4D1E9 387 aaKnown RBP10.77□□□□□ -0.69
RFC2-211ENST00000494019 SMTNL1A8MU46 457 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 CILPO75339 1184 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 HAPLN1P10915 354 aaPredicted RBP10.77□□□□□ -0.69
RFC2-211ENST00000494019 PTPN1P18031 435 aaKnown RBP10.77□□□□□ -0.69
RFC2-211ENST00000494019 ATF6P18850 670 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 CDK11BP21127 795 aaKnown RBP10.77□□□□□ -0.69
RFC2-211ENST00000494019 SP100P23497 879 aaPredicted RBP10.77□□□□□ -0.69
RFC2-211ENST00000494019 ALDH1A3P47895 512 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 TUFMP49411 452 aaKnown RBP10.77□□□□□ -0.69
RFC2-211ENST00000494019 GPR15P49685 360 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 YWHAEP62258 255 aaKnown RBP10.77□□□□□ -0.69
RFC2-211ENST00000494019 EXOC3L4Q17RC7 722 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 CFAP221Q4G0U5 840 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 CYP26C1Q6V0L0 522 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 RRAGAQ7L523 313 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 GRASPQ7Z6J2 395 aaPredicted RBP10.77□□□□□ -0.69
RFC2-211ENST00000494019 ARHGEF19Q8IW93 802 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 TTC39CQ8N584 583 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 EHBP1Q8NDI1 1231 aa10.77□□□□□ -0.69
RFC2-211ENST00000494019 MYCBPAPQ8TBZ2 947 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms