RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 IFNAR2P48551 515 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 PMS2P54278 862 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 IFI35P80217 286 aaPredicted RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 ACVR2BQ13705 512 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SLC29A2Q14542 456 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 FAM110CQ1W6H9 321 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SPDYCQ5MJ68 293 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 DNAJC24Q6P3W2 148 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 KATNAL2Q8IYT4 538 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 KLHL23Q8NBE8 558 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SLCO2A1Q92959 643 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 RNF25Q96BH1 459 aaPredicted RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 SEC16BQ96JE7 1060 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 OSBPL7Q9BZF2 842 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 ASB7Q9H672 318 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SUDS3Q9H7L9 328 aaPredicted RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 CHST7Q9NS84 486 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 HOXD8P13378 290 aaPredicted RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 CD19P15391 556 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 GJC1P36383 396 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 CDH8P55286 799 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SNX1Q13596 522 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 SLC10A6Q3KNW5 377 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 MARCH8Q5T0T0 291 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 DENND2CQ68D51 928 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 ERICH1Q86X53 443 aa14.55□□□□□ -0.08
VCP-207ENST00000493886 EPS8L3Q8TE67 593 aaKnown RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 DNAJC17Q9NVM6 304 aaKnown RBP14.55□□□□□ -0.08
VCP-207ENST00000493886 FSBPO95073 299 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 RALAP11233 206 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 CHN1P15882 459 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 PPP1R7Q15435 360 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 DGKDQ16760 1214 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 AGBL2Q5U5Z8 902 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 AP1ARQ63HQ0 302 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 C2orf69Q8N8R5 385 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 NPLOC4Q8TAT6 608 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 ATG4AQ8WYN0 398 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 CCDC114Q96M63 670 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 MCEEQ96PE7 176 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 HEMGNQ9BXL5 484 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 SDCBP2Q9H190 292 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 CD248Q9HCU0 757 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 KAT6AQ92794 2004 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 TSPAN1O60635 241 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 KYAT1Q16773 422 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 DENND1BQ6P3S1 775 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 DCUN1D2Q6PH85 259 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 SUGP1Q8IWZ8 645 aaKnown RBP14.54□□□□□ -0.08
VCP-207ENST00000493886 KIAA0319LQ8IZA0 1049 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 EXD1Q8NHP7 514 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 CXorf38Q8TB03 319 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 DCLK3Q9C098 648 aa14.54□□□□□ -0.08
VCP-207ENST00000493886 MTRF1LQ9UGC7 380 aaKnown RBP14.54□□□□□ -0.08
VCP-207ENST00000493886 ANKRD33BA6NCL7 494 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 DNM1LO00429 736 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 CELF2O95319 508 aaKnown RBP14.53□□□□□ -0.08
VCP-207ENST00000493886 RAD23BP54727 409 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 KRT17Q04695 432 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 ZNF252P-AS1Q0IIN9 211 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 KLF1Q13351 362 aaPredicted RBP14.53□□□□□ -0.08
VCP-207ENST00000493886 BYSLQ13895 437 aaKnown RBP14.53□□□□□ -0.08
VCP-207ENST00000493886 IQSEC1Q6DN90 963 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 SPATS2Q86XZ4 545 aaKnown RBP14.53□□□□□ -0.08
VCP-207ENST00000493886 CACNA2D3Q8IZS8 1091 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 OSBPL8Q9BZF1 889 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 SMYD3Q9H7B4 428 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 ADCY6O43306 1168 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 MED7O43513 233 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 PAEPP09466 180 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 ATICP31939 592 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 ACTN3Q08043 901 aaPredicted RBP14.53□□□□□ -0.08
VCP-207ENST00000493886 TMEM132DQ14C87 1099 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 CYP4A22Q5TCH4 519 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 C6orf89Q6UWU4 347 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 ILDR2Q71H61 639 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 ART4Q93070 314 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 RMI1Q9H9A7 625 aa14.53□□□□□ -0.08
VCP-207ENST00000493886 R3HDM2Q9Y2K5 976 aaKnown RBP14.53□□□□□ -0.08
VCP-207ENST00000493886 FOXO6A8MYZ6 492 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 OGDHQ02218 1023 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 TAP1Q03518 808 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 PPP1R15BQ5SWA1 713 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 ZNF410Q86VK4 478 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 C3orf20Q8ND61 904 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 ADPGKQ9BRR6 497 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 LHX5Q9H2C1 402 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 PABPC3Q9H361 631 aaKnown RBP14.52□□□□□ -0.08
VCP-207ENST00000493886 VRTNQ9H8Y1 702 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 HAUS2Q9NVX0 235 aa14.52□□□□□ -0.08
VCP-207ENST00000493886 A0A1B0GUA9 196 aa14.52□□□□□ -0.09
VCP-207ENST00000493886 SLC15A5A6NIM6 579 aa14.52□□□□□ -0.09
VCP-207ENST00000493886 RGS16O15492 202 aaPredicted RBP14.52□□□□□ -0.09
VCP-207ENST00000493886 TCF4P15884 667 aa14.52□□□□□ -0.09
VCP-207ENST00000493886 POLR2BP30876 1174 aaKnown RBP14.52□□□□□ -0.09
VCP-207ENST00000493886 ORC1Q13415 861 aa14.52□□□□□ -0.09
VCP-207ENST00000493886 PTPN20Q4JDL3 420 aa14.52□□□□□ -0.09
VCP-207ENST00000493886 MGARPQ8TDB4 240 aa14.52□□□□□ -0.09
VCP-207ENST00000493886 ACAP3Q96P50 834 aa14.52□□□□□ -0.09
VCP-207ENST00000493886 XPO6Q96QU8 1125 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms