RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 APEX2Q9UBZ4 518 aa19.07■□□□□ 0.64
PDLIM7-208ENST00000493815 FBXW11Q9UKB1 542 aa19.07■□□□□ 0.64
PDLIM7-208ENST00000493815 SPDYE4A6NLX3 237 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 H3BQ06 376 aaPredicted RBP19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 RFPL2O75678 378 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 SOAT2O75908 522 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 PTPN1P18031 435 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 GCNT1Q02742 428 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 COL19A1Q14993 1142 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 ARHGAP44Q17R89 818 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 DCP1BQ8IZD4 617 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 C12orf29Q8N999 325 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 SLC7A14Q8TBB6 771 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 FAXDC2Q96IV6 333 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 AFF4Q9UHB7 1163 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 SIK3Q9Y2K2 1263 aa19.06■□□□□ 0.64
PDLIM7-208ENST00000493815 C5orf42Q9H799 3197 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 A0A1B0GTH6 734 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 PRRG1O14668 218 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 EPHB6O15197 1021 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 CALCAP01258 141 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 ACO1P21399 889 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 KCNA5P22460 613 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 CYP27A1Q02318 531 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 FILIP1LQ4L180 1135 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 KLHDC7AQ5VTJ3 777 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 TPGS2Q68CL5 300 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 FAM171BQ6P995 826 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 UBR7Q8N806 425 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 CASP10Q92851 521 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 MYLPFQ96A32 169 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 PCED1BQ96HM7 432 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 PCMTD1Q96MG8 357 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 FAM49BQ9NUQ9 324 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 CDH22Q9UJ99 828 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 PCDHB4Q9Y5E5 795 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 CLDN5O00501 218 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 C8AP07357 584 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 ELF1P32519 619 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 RAD23BP54727 409 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 UBASH3AP57075 661 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 IQCEQ6IPM2 695 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 TMEM270Q6UE05 265 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 TMC5Q6UXY8 1006 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 TMEM184AQ6ZMB5 413 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 UNC93AQ86WB7 457 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 MYCBPAPQ8TBZ2 947 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 NT5C1AQ9BXI3 368 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 UBE2ZQ9H832 354 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 IFNKQ9P0W0 207 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 DNAJC12Q9UKB3 198 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 FHOD1Q9Y613 1164 aa19.05■□□□□ 0.64
PDLIM7-208ENST00000493815 BRWD1Q9NSI6 2320 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 RNF225M0QZC1 329 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 NCK2O43639 380 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 NOL4O94818 638 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 PNMA6AP0CW24 399 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 CCDC130P13994 396 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 CYP2F1P24903 491 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 PLCB2Q00722 1185 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 LIN9Q5TKA1 542 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 ANKRD54Q6NXT1 300 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 SYCE2Q6PIF2 218 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 SLC4A11Q8NBS3 891 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 TNIP3Q96KP6 325 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 SEPT5Q99719 369 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 PLEKHA4Q9H4M7 779 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 PCDHB5Q9Y5E4 795 aa19.04■□□□□ 0.64
PDLIM7-208ENST00000493815 FSD2A1L4K1 749 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 KRT5P13647 590 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 UCHL3P15374 230 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 MFAP3P55082 362 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 TFF2Q03403 129 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 RAPGEF1Q13905 1077 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 NR1I3Q14994 352 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 MGAT5BQ3V5L5 792 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 RARS2Q5T160 578 aaKnown RBP19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 SPATA2LQ8IUW3 424 aaPredicted RBP19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 TCEAL8Q8IYN2 117 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 CRYBG2Q8N1P7 616 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 HLA-CQ95604 372 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 TMEM176AQ96HP8 235 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 HEXIM2Q96MH2 286 aaKnown RBP19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 ERGIC2Q96RQ1 377 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 B3GNT5Q9BYG0 378 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 GANQ9H2C0 597 aa19.03■□□□□ 0.64
PDLIM7-208ENST00000493815 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 CCDC195A0A1B0GUA6 201 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 ZMYND10O75800 440 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 SRGAP2BP0DMP2 458 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 BDNFP23560 247 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 USP8P40818 1118 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 GPR15P49685 360 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 YWHAEP62258 255 aaKnown RBP19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 NFE2Q16621 373 aaPredicted RBP19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 PPM1LQ5SGD2 360 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 GPIHBP1Q8IV16 184 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 UNC80Q8N2C7 3258 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 GPR152Q8TDT2 470 aa19.02■□□□□ 0.64
PDLIM7-208ENST00000493815 MSLNLQ96KJ4 702 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms