RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 KCNJ1P48048 391 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 PSMC1P62191 440 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 LCLAT1Q6UWP7 414 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 XYLT1Q86Y38 959 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 ARFGAP2Q8N6H7 521 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 IPO4Q8TEX9 1081 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 MCRS1Q96EZ8 462 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 SNF8Q96H20 258 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 ATP8A1Q9Y2Q0 1164 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 PTPN22Q9Y2R2 807 aa11.4□□□□□ -0.58
PHACTR4-204ENST00000493669 CAPN15O75808 1086 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 GJB6O95452 261 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 RARGP13631 454 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 ATF7P17544 494 aaPredicted RBP11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 HOXC8P31273 242 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 OGDHQ02218 1023 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 PRAMEF19Q5SWL8 479 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 HOOK3Q86VS8 718 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 CCDC89Q8N998 374 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 HERPUD2Q9BSE4 406 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 CAPS2Q9BXY5 557 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 FRMD8P1Q9BZ68 369 aaPredicted RBP11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 SYNCQ9H7C4 482 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 HMGXB4Q9UGU5 601 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 CYTH4Q9UIA0 394 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 F8VP50 259 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 M0QYV0 167 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 NDC80O14777 642 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 XPOTO43592 962 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 KPNA6O60684 536 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 IVLP07476 585 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 SETSIPP0DME0 302 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 PSMA2P25787 234 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 GPD2P43304 727 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 NDST1P52848 882 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 PDCLQ13371 301 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 ODF2Q5BJF6 829 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 CYP4A22Q5TCH4 519 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 RGMBQ6NW40 437 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 ALKAL1Q6UXT8 129 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 HEXIM2Q96MH2 286 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 CPXM1Q96SM3 734 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 OSMRQ99650 979 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 ZFYVE28Q9HCC9 887 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 SNTG2Q9NY99 539 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 UBQLN1Q9UMX0 589 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 NR1D1P20393 614 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 FGFR4P22455 802 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 TFDP3Q5H9I0 405 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 DAB2IPQ5VWQ8 1189 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 DENND2CQ68D51 928 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 SPOCD1Q6ZMY3 1216 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 CEP128Q6ZU80 1094 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 TRMT10CQ7L0Y3 403 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 UNC93AQ86WB7 457 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 TMEM109Q9BVC6 243 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 DNAI2Q9GZS0 605 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 ASIC3Q9UHC3 531 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 NEU2Q9Y3R4 380 aa11.39□□□□□ -0.59
PHACTR4-204ENST00000493669 C17orf102A2RUQ5 167 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 CD4P01730 458 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 SLC10A3P09131 477 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 ATF2P15336 505 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 RFC1P35251 1148 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 CRYBB1P53674 252 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 SNX16P57768 344 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 SNX1Q13596 522 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 SNX17Q15036 470 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 RHBDF2Q6PJF5 856 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 ATG4AQ8WYN0 398 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 TRAIPQ9BWF2 469 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 HEMGNQ9BXL5 484 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 FOXP3Q9BZS1 431 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 TRIM6Q9C030 488 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 GJD2Q9UKL4 321 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 R3HDM2Q9Y2K5 976 aaKnown RBP11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 hCG_1818297A0A087WSY0 165 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 ERICH4A6NGS2 130 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 ERBB2P04626 1255 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 GJC1P36383 396 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 IFFO1Q0D2I5 559 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 XKR4Q5GH76 650 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 ZNF365Q70YC5 407 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 RNF25Q96BH1 459 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 CCDC114Q96M63 670 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 EIF2AQ9BY44 585 aaKnown RBP11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 EPB41L4BQ9H329 900 aa11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 DRG1Q9Y295 367 aaKnown RBP11.38□□□□□ -0.59
PHACTR4-204ENST00000493669 SRRM3A6NNA2 597 aaPredicted RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 GOLGA8SH3BPF8 625 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 MYL3P08590 195 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 AKR1A1P14550 325 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 KCNE1P15382 129 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 IVDP26440 423 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 PNPLA4P41247 253 aa11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 SLC25A11Q02978 314 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-204ENST00000493669 TMEM62Q0P6H9 643 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms