RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 POP1Q99575 1024 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 FDXACB1Q9BRP7 624 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 NUP85Q9BW27 656 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 BCO2Q9BYV7 579 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 FAM117AQ9C073 453 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 CDT1Q9H211 546 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 PRO3102Q9H379 93 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 PDZD7Q9H5P4 517 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 FAM114A2Q9NRY5 505 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 CNOT8Q9UFF9 292 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 IP6K2Q9UHH9 426 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 UBQLN1Q9UMX0 589 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 UTP11Q9Y3A2 253 aaKnown RBP6.76□□□□□ -1.33
SF3A3-208ENST00000489537 ALG6Q9Y672 507 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 SQORQ9Y6N5 450 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 LCTP09848 1927 aa6.76□□□□□ -1.33
SF3A3-208ENST00000489537 KRIT1O00522 736 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 FANCGO15287 622 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SEPT4O43236 478 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 OPA1O60313 960 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 BUB1BO60566 1050 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SGPL1O95470 568 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 VNN1O95497 513 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 FTCDO95954 541 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ABL1P00519 1130 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 GJB1P08034 283 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 MMEP08473 750 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SMIM10L2AP0DMW4 78 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SMIM10L2BP0DMW5 78 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 VDRP11473 427 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ARF4P18085 180 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ACO1P21399 889 aaKnown RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 CHRNA3P32297 505 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 CDH5P33151 784 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF132P52740 706 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 DRG2P55039 364 aaKnown RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 GSCP56915 257 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SLC8A3P57103 927 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 GJA9P57773 515 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 RBM10P98175 930 aaKnown RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 MTMR3Q13615 1198 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 CCL14Q16627 93 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 LONRF2Q1L5Z9 754 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 WDR72Q3MJ13 1102 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SPDYCQ5MJ68 293 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 CFAP58Q5T655 872 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ALS2CLQ60I27 953 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 DPH6Q7L8W6 267 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SLC47A2Q86VL8 602 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SESTD1Q86VW0 696 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ZDHHC17Q8IUH5 632 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 RHOT1Q8IXI2 618 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 CNPY4Q8N129 248 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 BBOF1Q8ND07 529 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SPATA18Q8TC71 538 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 IPO4Q8TEX9 1081 aaKnown RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 FNIP1Q8TF40 1166 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF606Q8WXB4 792 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 DDX1Q92499 740 aaKnown RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 TRIB2Q92519 343 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 RBM41Q96IZ5 413 aaKnown RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ZBTB45Q96K62 511 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 RUFY1Q96T51 708 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ZSWIM1Q9BR11 485 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 PACSIN1Q9BY11 444 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 FRMD8P1Q9BZ68 369 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 MTMR12Q9C0I1 747 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 THAP2Q9H0W7 228 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 RNF208Q9H0X6 261 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 UPF3AQ9H1J1 476 aaKnown RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 IKZF4Q9H2S9 585 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ANKZF1Q9H8Y5 726 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 UBN1Q9NPG3 1134 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 CYLDQ9NQC7 956 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 PAK6Q9NQU5 681 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 CISHQ9NSE2 258 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 DDX56Q9NY93 547 aaKnown RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 ADAM22Q9P0K1 906 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 HDAC6Q9UBN7 1215 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 TMEM59LQ9UK28 342 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 BARX2Q9UMQ3 279 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-208ENST00000489537 STXBP5LQ9Y2K9 1186 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 PCDHA3Q9Y5H8 950 aa6.75□□□□□ -1.33
SF3A3-208ENST00000489537 SIP14410 1827 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 A0A0U1RQJ8 604 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 TTLL8A6PVC2 850 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 LACTBL1A8MY62 500 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 SOX1O00570 391 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 GPR182O15218 404 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 SART1O43290 800 aaKnown RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 TSPAN1O60635 241 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 SRGAP2O75044 1071 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 ZRANB2O95218 330 aaKnown RBP eCLIP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 GAS8O95995 478 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 IGHA2P01877 340 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 ERBB2P04626 1255 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 MYL3P08590 195 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 KRT19P08727 400 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 KRT7P08729 469 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 RHOXF2BP0C7M4 288 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms