RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ANKFY1Q9P2R3 1169 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 CNOT8Q9UFF9 292 aaKnown RBP8.99□□□□□ -0.97
VTI1A-207ENST00000489357 NFU1Q9UMS0 254 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 FAN1Q9Y2M0 1017 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 GRIN2DO15399 1336 aa8.99□□□□□ -0.97
VTI1A-207ENST00000489357 ZBTB42B2RXF5 422 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 MYO1FO00160 1098 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 TNFRSF10AO00220 468 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 ABLIM1O14639 778 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 FSCN2O14926 492 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 THAP12O43422 761 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 PPFIA4O75335 1185 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 VNN1O95497 513 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 TNNC2P02585 160 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 CALB1P05937 261 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 ASGR1P07306 291 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 MCF2P10911 925 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 EIF4BP23588 611 aaKnown RBP8.98□□□□□ -0.97
VTI1A-207ENST00000489357 TMOD1P28289 359 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 ATICP31939 592 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 CDH5P33151 784 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-207ENST00000489357 ACOT2P49753 483 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 PURAQ00577 322 aaKnown RBP8.98□□□□□ -0.97
VTI1A-207ENST00000489357 CAV1Q03135 178 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 HLTFQ14527 1009 aaKnown RBP eCLIP8.98□□□□□ -0.97
VTI1A-207ENST00000489357 MESDQ14696 234 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 HSDL1Q3SXM5 330 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 GNASQ5JWF2 1037 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 LRRC38Q5VT99 294 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 DUPD1Q68J44 220 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 PLEKHA7Q6IQ23 1121 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 SLC39A5Q6ZMH5 540 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 CEP128Q6ZU80 1094 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 MON1BQ7L1V2 547 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 ARFGAP2Q8N6H7 521 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 RNF149Q8NC42 400 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 GRK7Q8WTQ7 553 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 IFT81Q8WYA0 676 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 TSPAN18Q96SJ8 248 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 HTATIP2Q9BUP3 242 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 HAPLN2Q9GZV7 340 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 AP5M1Q9H0R1 490 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 DDX47Q9H0S4 455 aaKnown RBP8.98□□□□□ -0.97
VTI1A-207ENST00000489357 GOLPH3Q9H4A6 298 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 ASB7Q9H672 318 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 LRRC19Q9H756 370 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 FAM204AQ9H8W3 233 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 VRTNQ9H8Y1 702 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 SPC25Q9HBM1 224 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 TOPORSQ9NS56 1045 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-207ENST00000489357 PARVAQ9NVD7 372 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 STRIP2Q9ULQ0 834 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 CEP83Q9Y592 693 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 PCDHB9Q9Y5E1 797 aa8.98□□□□□ -0.97
VTI1A-207ENST00000489357 A0A1W2PQ45 241 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-207ENST00000489357 A0A1W2PQY0 241 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 KBTBD13C9JR72 458 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 H0YGN5 161 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 HAS3O00219 553 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 MED7O43513 233 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 ZEB2O60315 1214 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 KPNA6O60684 536 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 PPFIA2O75334 1257 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 CABYRO75952 493 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 PROSCO94903 275 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 STAU1O95793 577 aaKnown RBP8.97□□□□□ -0.97
VTI1A-207ENST00000489357 PAEPP09466 180 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 C6orf222P0C671 652 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-207ENST00000489357 P4HA1P13674 534 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 ECHS1P30084 290 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 GNA15P30679 374 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 ACTN2P35609 894 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 DNA2P51530 1060 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 GSCP56915 257 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-207ENST00000489357 NOMO3P69849 1222 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 BEX3Q00994 111 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 LMNB2Q03252 620 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 LRRC26Q2I0M4 334 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 ATF7IP2Q5U623 682 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 ANKRD33Q7Z3H0 272 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 ZNF410Q86VK4 478 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 SLC13A5Q86YT5 568 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-207ENST00000489357 RHOT1Q8IXI2 618 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 CYP4X1Q8N118 509 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 LINC01465Q8N7H1 131 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 RBBP8NLQ8NC74 664 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-207ENST00000489357 TMEM35BQ8NCS4 154 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 OR6J1Q8NGC5 347 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 SNIP1Q8TAD8 396 aaKnown RBP8.97□□□□□ -0.97
VTI1A-207ENST00000489357 AFG1LQ8WV93 481 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 KAT2BQ92831 832 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 ANKRD36BP1Q96IX9 119 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 TOX2Q96NM4 488 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 FMO2Q99518 471 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 TCHPQ9BT92 498 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 AP1M1Q9BXS5 423 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 LHX5Q9H2C1 402 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 CYP3A43Q9HB55 503 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 MTRF1LQ9UGC7 380 aaKnown RBP8.97□□□□□ -0.97
VTI1A-207ENST00000489357 IP6K2Q9UHH9 426 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms