RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 UBE2HP62256 183 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 SETQ01105 290 aaPredicted RBP6.93□□□□□ -1.3
CAPN13-206ENST00000485248 ROR1Q01973 937 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 ZNF33AQ06730 810 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 BFSP1Q12934 665 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 TRDNQ13061 729 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 PCBP1Q15365 356 aaKnown RBP eCLIP6.93□□□□□ -1.3
CAPN13-206ENST00000485248 SMAD1Q15797 465 aaKnown RBP6.93□□□□□ -1.3
CAPN13-206ENST00000485248 IMMTQ16891 758 aaKnown RBP6.93□□□□□ -1.3
CAPN13-206ENST00000485248 MCMDC2Q4G0Z9 681 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 GPR158Q5T848 1215 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 DMRTA1Q5VZB9 504 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 CATIPQ7Z7H3 387 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 LAPTM4BQ86VI4 370 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 RASSF3Q86WH2 238 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 TCEAL8Q8IYN2 117 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 HMGB4Q8WW32 186 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 CD101Q93033 1021 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 NIFKQ9BYG3 293 aaKnown RBP6.93□□□□□ -1.3
CAPN13-206ENST00000485248 ATXN3LQ9H3M9 355 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 EBF3Q9H4W6 596 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 HES2Q9Y543 173 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 BACE2Q9Y5Z0 518 aa6.93□□□□□ -1.3
CAPN13-206ENST00000485248 ATG2BQ96BY7 2078 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 DOPEY1Q5JWR5 2465 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 NRG2O14511 850 aaPredicted RBP6.92□□□□□ -1.3
CAPN13-206ENST00000485248 TERTO14746 1132 aaKnown RBP6.92□□□□□ -1.3
CAPN13-206ENST00000485248 TNFSF14O43557 240 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 NDUFS2O75306 463 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 FOSP01100 380 aaPredicted RBP6.92□□□□□ -1.3
CAPN13-206ENST00000485248 THP07101 528 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 CCNYL3P0C7X3 344 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 SRGAP2CP0DJJ0 459 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 CDK4P11802 303 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 CPB1P15086 417 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 AKAP5P24588 427 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 CHMLP26374 656 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 ELAVL4P26378 380 aaKnown RBP6.92□□□□□ -1.3
CAPN13-206ENST00000485248 SMARCA1P28370 1054 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 HSPA4P34932 840 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 MATKP42679 507 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 AFMP43652 599 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 GALK1P51570 392 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 NEK4P51957 841 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 EPHB3P54753 998 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 PCBP4P57723 403 aaKnown RBP6.92□□□□□ -1.3
CAPN13-206ENST00000485248 GABPB1Q06547 395 aaPredicted RBP6.92□□□□□ -1.3
CAPN13-206ENST00000485248 GRIK2Q13002 908 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 TAF12Q16514 161 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 WDR45BQ5MNZ6 344 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 TPGS2Q68CL5 300 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 POTEHQ6S545 545 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 DHRS13Q6UX07 377 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 EXOC8Q8IYI6 725 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 DEFB119Q8N690 84 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 SMG8Q8ND04 991 aaKnown RBP6.92□□□□□ -1.3
CAPN13-206ENST00000485248 SHKBP1Q8TBC3 707 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 KCNB2Q92953 911 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 RSPRY1Q96DX4 576 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 THAP11Q96EK4 314 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 NAF1Q96HR8 494 aaKnown RBP6.92□□□□□ -1.3
CAPN13-206ENST00000485248 FNBP1Q96RU3 617 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 NRSN2Q9GZP1 204 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 CSRNP2Q9H175 543 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 CPNE5Q9HCH3 593 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 GKN1Q9NS71 199 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 TM7SF3Q9NS93 570 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 MIOSQ9NXC5 875 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 KLK14Q9P0G3 267 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 ZSWIM5Q9P217 1185 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 COL4A3BPQ9Y5P4 624 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 NCANO14594 1321 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 PI4KAP42356 2102 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 DOPEY2Q9Y3R5 2298 aa6.92□□□□□ -1.3
CAPN13-206ENST00000485248 TEX15Q9BXT5 2789 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 PCDH15Q96QU1 1955 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 MEI4A8MW99 385 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 GOLGA6L6A8MZA4 724 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 CHMP2AO43633 222 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 CYTH3O43739 400 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 CBFA2T3O75081 653 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 B3GAT3O94766 335 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 ADCY5O95622 1261 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 PTMAP06454 111 aaKnown RBP6.91□□□□□ -1.3
CAPN13-206ENST00000485248 FGFR3P22607 806 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 U2AF2P26368 475 aaKnown RBP eCLIP6.91□□□□□ -1.3
CAPN13-206ENST00000485248 SREBF1P36956 1147 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 AVPR1AP37288 418 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 ALDH1A3P47895 512 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 DRP2Q13474 957 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 MRPL58Q14197 206 aaKnown RBP6.91□□□□□ -1.3
CAPN13-206ENST00000485248 CRY1Q16526 586 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 INF2Q27J81 1249 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 EOGTQ5NDL2 527 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 UBXN11Q5T124 520 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 CAPN12Q6ZSI9 719 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 NIPA1Q7RTP0 329 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 HEATR3Q7Z4Q2 680 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 KSR1Q8IVT5 923 aa6.91□□□□□ -1.3
CAPN13-206ENST00000485248 PSPC1Q8WXF1 523 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms