RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CHRDQ9H2X0 955 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 ST6GALNAC4Q9H4F1 302 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 SUV39H2Q9H5I1 410 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 POMKQ9H5K3 350 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 WDR6Q9NNW5 1121 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 KCNH3Q9ULD8 1083 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 EXOC7Q9UPT5 735 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 NUB1Q9Y5A7 615 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 SRPRBQ9Y5M8 271 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 MYH9P35579 1960 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 GBF1Q92538 1859 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 FAM86C2PA6NEL3 165 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 C2CD4DB7Z1M9 353 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 PODXLO00592 558 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 TGM5O43548 720 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 NID1P14543 1247 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 GAP43P17677 238 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 PLCG1P19174 1290 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 SYT1P21579 422 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 MARCKSP29966 332 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 ELF1P32519 619 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 MATR3P43243 847 aaKnown RBP eCLIP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 NCKAP1LP55160 1127 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 AMPD3Q01432 767 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 TDGQ13569 410 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 PPM1LQ5SGD2 360 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 RRAGBQ5VZM2 374 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 EEF1DP3Q658K8 133 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 TPGS2Q68CL5 300 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 LILRA6Q6PI73 481 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 SV2BQ7L1I2 683 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 TAS1R1Q7RTX1 841 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 KCNK18Q7Z418 384 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 PALB2Q86YC2 1186 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 HSCBQ8IWL3 235 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 FBXL6Q8N531 539 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 C12orf76Q8N812 135 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 LNX1Q8TBB1 728 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 TTC9Q92623 222 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 RAD54LQ92698 747 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 PYM1Q9BRP8 204 aaKnown RBP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 APOL5Q9BWW9 433 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 NIF3L1Q9GZT8 377 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 CUEDC2Q9H467 287 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 ASB7Q9H672 318 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 RPF1Q9H9Y2 349 aaKnown RBP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 NOP53Q9NZM5 478 aaKnown RBP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 ANKFY1Q9P2R3 1169 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 EPS15L1Q9UBC2 864 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 MTRRQ9UBK8 725 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 SALL4Q9UJQ4 1053 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 TBX20Q9UMR3 447 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 UBQLN1Q9UMX0 589 aaKnown RBP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 DERAQ9Y315 318 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 COL4A4P53420 1690 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-215ENST00000484203 CLUHO75153 1309 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 PTPRSQ13332 1948 aa6.7□□□□□ -1.34
PTCD3-215ENST00000484203 A0A0B4J269 797 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 K7ENM7 598 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF197O14709 1029 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 MSTNO14793 375 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 KIAA0391O15091 583 aaKnown RBP6.69□□□□□ -1.34
PTCD3-215ENST00000484203 OGTO15294 1046 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 STX6O43752 255 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 SMNDC1O75940 238 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTCD3-215ENST00000484203 GBP2P32456 591 aaPredicted RBP6.69□□□□□ -1.34
PTCD3-215ENST00000484203 CLCNKBP51801 687 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 ATP11AP98196 1134 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 GTF2BQ00403 316 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 SLC39A14Q15043 492 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 NAB2Q15742 525 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 ARSHQ5FYA8 562 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 RTP2Q5QGT7 225 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 CEP135Q66GS9 1140 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 SLC8B1Q6J4K2 584 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 MTSS1LQ765P7 747 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
PTCD3-215ENST00000484203 NT5DC4Q86YG4 428 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 MAP4K3Q8IVH8 894 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 ELMOD1Q8N336 334 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 CEP120Q8N960 986 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 LEMD2Q8NC56 503 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 BEST2Q8NFU1 509 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF461Q8TAF7 563 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 DMRTB1Q96MA1 342 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 PLIN2Q99541 437 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 CLSTN3Q9BQT9 956 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 REEP2Q9BRK0 252 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 RASSF4Q9H2L5 321 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 MFSD1Q9H3U5 465 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 ZHX3Q9H4I2 956 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 MAGEF1Q9HAY2 307 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 FBXW11Q9UKB1 542 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 DSEQ9UL01 958 aa6.69□□□□□ -1.34
PTCD3-215ENST00000484203 TRIOO75962 3097 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 TTC26A0AVF1 554 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 OR6C75A6NL08 312 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 ABLIM1O14639 778 aa6.68□□□□□ -1.34
PTCD3-215ENST00000484203 PRRG1O14668 218 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms